Protein Family : RNA recognition motif containing protein, expressed 124569616

Method ID:  5269 Method Name:  Grass
Sequence Alignment:  View MSA Member Count:  19

19 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Traes_1AS_E700FE9D9 (1 of 3) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) T. aestivum v2.2 4515   ta_iwgsc_1as_v1_3283727: 2915-7429
Traes_1BS_DB9A576D4 (1 of 3) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) T. aestivum v2.2 4475   ta_iwgsc_1bs_v1_3469276: 15008-19482
Traes_1DS_3B91A8AF9 (1 of 3) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) T. aestivum v2.2 4613   ta_iwgsc_1ds_v1_1910343: 853-5465
Seita.3G062600 (1 of 1) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) S. italica v2.2 4294   scaffold_3: 3960345-3964638
Bradi2g37420 (1 of 1) PF00076//PF00098//PF14259//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) // Zinc knuckle (zf-CCHC_4) B. distachyon v3.1 3772   Bd2: 37492987-37496758
LOC_Os05g02400 (1 of 1) KOG0131//KOG4400 - Splicing factor 3b, subunit 4 // E3 ubiquitin ligase interacting with arginine methyltransferase O. sativa v7.0 3095   Chr5: 788617-791711
Zm00008a023884 (1 of 1) PF00076//PF00098//PF14259//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) // Zinc knuckle (zf-CCHC_4) Z. mays PH207 v1.1 5549   chr06: 35035600-35041148
Pavir.3KG105500 (1 of 2) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) P. virgatum v4.1 4302   Chr03K: 9454211-9458512
Pavir.3KG107300 (1 of 2) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) P. virgatum v4.1 6593   Chr03K: 9603815-9610407
Sobic.009G016400 (1 of 1) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) S. bicolor v3.1.1 3961   Chr09: 1537743-1541703
HORVU1Hr1G006890 (1 of 1) KOG4400 - E3 ubiquitin ligase interacting with arginine methyltransferase H. vulgare r1 5110   chr1H: 13586405-13591514
Zm00001d035608 (1 of 1) PTHR24012//PTHR24012:SF386 - FAMILY NOT NAMED // PHRAGMOPLASTIN INTERACTING PROTEIN 1 Z. mays RefGen_V4 6007   6: 36528925-36534931
Pahal.3G094700 (1 of 1) KOG4210 - Nuclear localization sequence binding protein P. hallii v3.1 5487   Chr03: 6030751-6036237
PhHAL.3G089100 (1 of 1) KOG4210 - Nuclear localization sequence binding protein P. hallii HAL v2.1 4511   Chr03: 5339133-5343643
Misin16G003400 (1 of 2) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) M. sinensis v7.1 5368   Chr16: 743117-748484
Misin17G018500 (1 of 2) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) M. sinensis v7.1 4100   Chr17: 4374523-4378622
OsKitaake05g011600 (1 of 1) PF00076//PF00098//PF14392 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) // Zinc knuckle (zf-CCHC_4) O. sativa Kitaake v3.1 3249   Chr5: 948640-951888
Sevir.3G063300 (1 of 1) KOG4210//KOG4400 - Nuclear localization sequence binding protein // E3 ubiquitin ligase interacting with arginine methyltransferase S. viridis v2.1 4609   Chr_03: 4069714-4074322
Brast08G223000 (1 of 1) KOG0148//KOG4210 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // Nuclear localization sequence binding protein B. stacei v1.1 3765   Chr08: 19127677-19131441

19 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Traes_1AS_E700FE9D9.2 T. aestivum v2.2 124569616 RNA recognition motif containing protein, expressed 3 5269 Grass
Traes_1BS_DB9A576D4.2 T. aestivum v2.2 124569616 RNA recognition motif containing protein, expressed 3 5269 Grass
Traes_1DS_3B91A8AF9.1 T. aestivum v2.2 124569616 RNA recognition motif containing protein, expressed 3 5269 Grass
Seita.3G062600.1.p S. italica v2.2 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
Bradi2g37420.1.p B. distachyon v3.1 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
Brast08G223000.1.p B. stacei v1.1 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
LOC_Os05g02400.1 O. sativa v7.0 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
Zm00008a023884_P01 Z. mays PH207 v1.1 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
Pavir.3KG107300.1.p P. virgatum v4.1 124569616 RNA recognition motif containing protein, expressed 2 5269 Grass
Pavir.3KG105500.1.p P. virgatum v4.1 124569616 RNA recognition motif containing protein, expressed 2 5269 Grass
HORVU1Hr1G006890.1 H. vulgare r1 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
Zm00001d035608_P001 Z. mays RefGen_V4 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
Pahal.3G094700.1.p P. hallii v3.1 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
PhHAL.3G089100.1.p P. hallii HAL v2.1 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
Misin17G018500.1.p M. sinensis v7.1 124569616 RNA recognition motif containing protein, expressed 2 5269 Grass
Misin16G003400.1.p M. sinensis v7.1 124569616 RNA recognition motif containing protein, expressed 2 5269 Grass
OsKitaake05g011600.1.p O. sativa Kitaake v3.1 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
Sevir.3G063300.1.p S. viridis v2.1 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass
Sobic.009G016400.1.p S. bicolor v3.1.1 124569616 RNA recognition motif containing protein, expressed 1 5269 Grass