Protein Family : K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 124584173

Method ID:  5269 Method Name:  Grass
Sequence Alignment:  View MSA Member Count:  12
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12 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Traes_3AL_51A4FD8BE (1 of 15) PF04983//PF04998//PF05000 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) T. aestivum v2.2 1601   ta_iwgsc_3al_v1_4310602: 1-1601
Traes_4BL_F4056AB1E (1 of 15) PF04983//PF04998//PF05000 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) T. aestivum v2.2 2153   ta_iwgsc_4bl_v1_7032120: 10474-12626
Traes_4BS_ECFA6F553 (1 of 15) PF04983//PF04998//PF05000 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) T. aestivum v2.2 2012   ta_iwgsc_4bs_v1_3318923: 1-2012
Traes_4DL_56A2A54D1 (1 of 15) PF04983//PF04998//PF05000 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) T. aestivum v2.2 1949   ta_iwgsc_4dl_v3_14472569: 243-2191
Traes_5BL_808F1FE11 (1 of 15) PF04983//PF04998//PF05000 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) T. aestivum v2.2 1416   ta_iwgsc_5bl_v1_4382580: 1-1416
Traes_5BS_810643B91 (1 of 14) PF04998//PF05000 - RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) T. aestivum v2.2 1549   ta_iwgsc_5bs_v1_2285518: 110-1658
Traes_6DS_086988A37 (1 of 15) PF04983//PF04998//PF05000 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) T. aestivum v2.2 9918   ta_iwgsc_6ds_v1_2125648: 4-9921
Pavir.6KG114200 (1 of 1) PF04983//PF04998//PF05000 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) P. virgatum v4.1 810   Chr06K: 13859738-13860547
Pahal.2G129700 (1 of 1) PF04983//PF04998//PF05000 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) P. hallii v3.1 3188   Chr02: 11526775-11529962
PhHAL.9G266500 (1 of 4) PTHR19376//PTHR19376:SF38 - DNA-DIRECTED RNA POLYMERASE // DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'' P. hallii HAL v2.1 894   Chr09: 20413367-20414260
OsKitaake01g355500 (1 of 2) PTHR19376//PTHR19376:SF38 - DNA-DIRECTED RNA POLYMERASE // DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'' O. sativa Kitaake v3.1 810   Chr1: 34369828-34370637
Brast08G036500 (1 of 2) PTHR19376:SF38 - DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'' B. stacei v1.1 1134   Chr08: 2142380-2143513

12 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Traes_6DS_086988A37.1 T. aestivum v2.2 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 7 5269 Grass
Traes_4BS_ECFA6F553.1 T. aestivum v2.2 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 7 5269 Grass
Traes_3AL_51A4FD8BE.1 T. aestivum v2.2 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 7 5269 Grass
Traes_5BL_808F1FE11.1 T. aestivum v2.2 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 7 5269 Grass
Traes_5BS_810643B91.1 T. aestivum v2.2 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 7 5269 Grass
Traes_4BL_F4056AB1E.1 T. aestivum v2.2 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 7 5269 Grass
Traes_4DL_56A2A54D1.1 T. aestivum v2.2 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 7 5269 Grass
Brast08G036500.1.p B. stacei v1.1 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 1 5269 Grass
Pavir.6KG114200.1.p P. virgatum v4.1 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 1 5269 Grass
Pahal.2G129700.1.p P. hallii v3.1 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 1 5269 Grass
OsKitaake01g355500.1.p O. sativa Kitaake v3.1 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 1 5269 Grass
PhHAL.9G266500.1.p P. hallii HAL v2.1 124584173 K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) 1 5269 Grass