Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 124251080

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  25

25 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30076.t000004 (1 of 9) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) R. communis v0.1 1646   30076: 24913-26558
orange1.1g023688m.g (1 of 7) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) C. sinensis v1.1 2095   scaffold00001: 3340765-3342859
AT2G46780 (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) A. thaliana TAIR10 2213   Chr2: 19229293-19231505
Thhalv10001545m.g (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) E. salsugineum v1.0 2211   scaffold_22: 1378449-1380659
Ciclev10021586m.g (1 of 7) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) C. clementina v1.0 2385   scaffold_3: 47620774-47623158
Lus10002684.g (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) L. usitatissimum v1.0 1731   scaffold1347: 69781-71511
Lus10030202.g (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) L. usitatissimum v1.0 1746   scaffold217: 200834-202579
Gorai.001G150700 (1 of 12) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) G. raimondii v2.1 3081   Chr01: 20874015-20877095
Gorai.007G112700 (1 of 12) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) G. raimondii v2.1 2481   Chr07: 8742464-8744944
Thecc1EG005042 (1 of 6) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) T. cacao v1.1 3042   scaffold_1: 34750648-34753689
Araha.8989s0002 (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) A. halleri v1.1 2363   Scaffold8989: 20641-23003
Cagra.0050s0023 (1 of 8) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) C. grandiflora v1.1 2353   Scaffold50: 77823-80175
Brara.E00103 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 2208   A05: 604445-606652
Brara.D02818 (1 of 16) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) B. rapa FPsc v1.3 2226   A04: 21316255-21318480
Bostr.25993s0089 (1 of 9) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) B. stricta v1.2 2291   Scaffold25993: 438342-440632
SapurV1A.0162s0250 (1 of 18) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) S. purpurea v1.0 3063   chr14: 7935634-7938696
SapurV1A.0003s0520 (1 of 18) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) S. purpurea v1.0 2966   chr02: 14090337-14093302
Manes.05G016900 (1 of 14) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) M. esculenta v6.1 3246   Chromosome05: 1213560-1216805
Manes.01G240400 (1 of 14) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) M. esculenta v6.1 3005   Chromosome01: 32002795-32005799
AL4G46250 (1 of 13) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) A. lyrata v2.1 2280   scaffold_4: 22763540-22765819
Potri.002G179100 (1 of 13) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) P. trichocarpa v3.1 3023   Chr02: 13933548-13936570
Potri.014G105101 (1 of 13) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) P. trichocarpa v3.1 3097   Chr14: 8286780-8289876
Podel.14G108600 (1 of 12) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) P. deltoides WV94 v2.1 3041   Chr14: 7956780-7959820
Podel.02G198100 (1 of 12) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) P. deltoides WV94 v2.1 2971   Chr02: 15603054-15606024
Carub.0004s2949 (1 of 11) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) C. rubella v1.1 2297   scaffold_4: 14539119-14541415

25 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g023688m C. sinensis v1.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Ciclev10021586m C. clementina v1.0 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Lus10030202 L. usitatissimum v1.0 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Lus10002684 L. usitatissimum v1.0 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Araha.8989s0002.1.p A. halleri v1.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Cagra.0050s0023.1.p C. grandiflora v1.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Bostr.25993s0089.1.p B. stricta v1.2 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Manes.05G016900.1.p M. esculenta v6.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Manes.01G240400.1.p M. esculenta v6.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Podel.02G198100.1.p P. deltoides WV94 v2.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
30076.m004440 R. communis v0.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
AT2G46780.1 A. thaliana TAIR10 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Thhalv10001545m E. salsugineum v1.0 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Gorai.001G150700.1 G. raimondii v2.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Gorai.007G112700.1 G. raimondii v2.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Thecc1EG005042t2 T. cacao v1.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Brara.D02818.1.p B. rapa FPsc v1.3 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Brara.E00103.1.p B. rapa FPsc v1.3 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
SapurV1A.0162s0250.1.p S. purpurea v1.0 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
SapurV1A.0003s0520.1.p S. purpurea v1.0 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
AL4G46250.t1 A. lyrata v2.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Potri.002G179100.1.p P. trichocarpa v3.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Potri.014G105101.1.p P. trichocarpa v3.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Podel.14G108600.1.p P. deltoides WV94 v2.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Carub.0004s2949.1.p C. rubella v1.1 124251080 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae