Protein Family : cold, circadian rhythm, and RNA binding 1 124296173

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  6

6 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
AT4G39260 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 CCR1 1181   Chr4: 18273899-18275079
Cagra.2374s0022 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 1033   Scaffold2374: 60552-61584
Brara.H01810 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 979   A08: 17296692-17297670
Bostr.25542s0115 (1 of 225) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. stricta v1.2 1075   Scaffold25542: 470754-471828
AL7G11250 (1 of 260) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. lyrata v2.1 1102   scaffold_7: 473634-474735
Carub.0007s0118 (1 of 247) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. rubella v1.1 1013   scaffold_7: 419506-420518

6 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cagra.2374s0022.1.p C. grandiflora v1.1 124296173 cold, circadian rhythm, and RNA binding 1 1 5266 SBM
AL7G11250.t1 A. lyrata v2.1 124296173 cold, circadian rhythm, and RNA binding 1 1 5266 SBM
Carub.0007s0118.1.p C. rubella v1.1 124296173 cold, circadian rhythm, and RNA binding 1 1 5266 SBM
AT4G39260.1 A. thaliana TAIR10 124296173 cold, circadian rhythm, and RNA binding 1 1 5266 SBM
Brara.H01810.1.p B. rapa FPsc v1.3 124296173 cold, circadian rhythm, and RNA binding 1 1 5266 SBM
Bostr.25542s0115.1.p B. stricta v1.2 124296173 cold, circadian rhythm, and RNA binding 1 1 5266 SBM