Protein Family : E3 ubiquitin ligase involved in syntaxin degradation 122462208

Method ID:  5262 Method Name:  Malpighiales
Sequence Alignment:  View MSA Member Count:  12

12 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30078.t000013 (1 of 1) KOG0963//KOG0978//KOG0993//KOG4593 - Transcription factor/CCAAT displacement protein CDP1 // E3 ubiquitin ligase involved in syntaxin degradation // Rab5 GTPase effector Rabaptin-5 // Mitotic checkpoint protein MAD1 R. communis v0.1 5332   30078: 64844-70175
Lus10029303.g (1 of 4) PTHR13140//PTHR13140:SF480 - MYOSIN L. usitatissimum v1.0 7156   scaffold360: 542270-549425
Lus10037927.g (1 of 4) PTHR13140//PTHR13140:SF480 - MYOSIN L. usitatissimum v1.0 4728   scaffold475: 393193-397920
Lus10016240.g (1 of 2) KOG0962//KOG4674 - DNA repair protein RAD50, ABC-type ATPase/SMC superfamily // Uncharacterized conserved coiled-coil protein L. usitatissimum v1.0 7526   scaffold947: 411924-419449
SapurV1A.0226s0340 (1 of 1) KOG1937//KOG4593 - Uncharacterized conserved protein // Mitotic checkpoint protein MAD1 S. purpurea v1.0 7696   chr06: 8581312-8589007
SapurV1A.0394s0210 (1 of 1) KOG4687 - Uncharacterized coiled-coil protein S. purpurea v1.0 7335   chr08: 1585562-1592896
Manes.08G016800 (1 of 1) KOG0933 - Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) M. esculenta v6.1 5521   Chromosome08: 1576812-1582332
Manes.10G053000 (1 of 1) KOG4673//KOG4674 - Transcription factor TMF, TATA element modulatory factor // Uncharacterized conserved coiled-coil protein M. esculenta v6.1 8723   Chromosome10: 5437659-5446381
Potri.006G120400 (1 of 2) PTHR13140//PTHR13140:SF480 - MYOSIN // SUBFAMILY NOT NAMED P. trichocarpa v3.1 11084   Chr06: 9539559-9550642
Potri.008G029800 (1 of 1) KOG4687 - Uncharacterized coiled-coil protein P. trichocarpa v3.1 7075   Chr08: 1641035-1648109
Podel.08G036500 (1 of 1) KOG4687 - Uncharacterized coiled-coil protein P. deltoides WV94 v2.1 7164   Chr08: 2354463-2361626
Podel.06G130100 (1 of 1) KOG0993 - Rab5 GTPase effector Rabaptin-5 P. deltoides WV94 v2.1 10675   Chr06: 10579843-10590517

12 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Lus10029303 L. usitatissimum v1.0 122462208 E3 ubiquitin ligase involved in syntaxin degradation 3 5262 Malpighiales
SapurV1A.0394s0210.1.p S. purpurea v1.0 122462208 E3 ubiquitin ligase involved in syntaxin degradation 2 5262 Malpighiales
Manes.08G016800.1.p M. esculenta v6.1 122462208 E3 ubiquitin ligase involved in syntaxin degradation 2 5262 Malpighiales
Manes.10G053000.1.p M. esculenta v6.1 122462208 E3 ubiquitin ligase involved in syntaxin degradation 2 5262 Malpighiales
Potri.008G029800.3.p P. trichocarpa v3.1 122462208 E3 ubiquitin ligase involved in syntaxin degradation 2 5262 Malpighiales
Podel.08G036500.1.p P. deltoides WV94 v2.1 122462208 E3 ubiquitin ligase involved in syntaxin degradation 2 5262 Malpighiales
30078.m002220 R. communis v0.1 122462208 E3 ubiquitin ligase involved in syntaxin degradation 1 5262 Malpighiales
Lus10037927 L. usitatissimum v1.0 122462208 E3 ubiquitin ligase involved in syntaxin degradation 3 5262 Malpighiales
Lus10016240 L. usitatissimum v1.0 122462208 E3 ubiquitin ligase involved in syntaxin degradation 3 5262 Malpighiales
SapurV1A.0226s0340.1.p S. purpurea v1.0 122462208 E3 ubiquitin ligase involved in syntaxin degradation 2 5262 Malpighiales
Potri.006G120400.2.p P. trichocarpa v3.1 122462208 E3 ubiquitin ligase involved in syntaxin degradation 2 5262 Malpighiales
Podel.06G130100.1.p P. deltoides WV94 v2.1 122462208 E3 ubiquitin ligase involved in syntaxin degradation 2 5262 Malpighiales