Protein Family : Nonsense-mediated decay protein Upf3 122449211

Method ID:  5262 Method Name:  Malpighiales
Sequence Alignment:  View MSA Member Count:  9

9 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29765.t000010 (1 of 1) PTHR13112//PTHR13112:SF0 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN // FI21285P1 R. communis v0.1 7573   29765: 93552-101124
Lus10037346.g (1 of 3) PTHR13112:SF0 - FI21285P1 L. usitatissimum v1.0 3955   scaffold462: 1423142-1427096
Lus10035769.g (1 of 3) PTHR13112:SF0 - FI21285P1 L. usitatissimum v1.0 4528   scaffold464: 1268974-1273501
SapurV1A.0942s0050 (1 of 4) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) S. purpurea v1.0 7643   Scaffold0942: 22808-30450
SapurV1A.0225s0380 (1 of 4) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) S. purpurea v1.0 7647   chr01: 18810545-18818191
Manes.07G025700 (1 of 2) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN M. esculenta v6.1 6495   Chromosome07: 2393311-2399805
Manes.10G116400 (1 of 1) KOG1295 - Nonsense-mediated decay protein Upf3 M. esculenta v6.1 9341   Chromosome10: 22895791-22905131
Potri.004G225800 (1 of 3) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) P. trichocarpa v3.1 10484   Chr04: 23166367-23176850
Podel.04G230500 (1 of 3) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) P. deltoides WV94 v2.1 7780   Chr04: 23075118-23082897

9 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
SapurV1A.0225s0380.1.p S. purpurea v1.0 122449211 Nonsense-mediated decay protein Upf3 2 5262 Malpighiales
SapurV1A.0942s0050.1.p S. purpurea v1.0 122449211 Nonsense-mediated decay protein Upf3 2 5262 Malpighiales
29765.m000728 R. communis v0.1 122449211 Nonsense-mediated decay protein Upf3 1 5262 Malpighiales
Lus10037346 L. usitatissimum v1.0 122449211 Nonsense-mediated decay protein Upf3 2 5262 Malpighiales
Lus10035769 L. usitatissimum v1.0 122449211 Nonsense-mediated decay protein Upf3 2 5262 Malpighiales
Manes.07G025700.1.p M. esculenta v6.1 122449211 Nonsense-mediated decay protein Upf3 2 5262 Malpighiales
Manes.10G116400.1.p M. esculenta v6.1 122449211 Nonsense-mediated decay protein Upf3 2 5262 Malpighiales
Potri.004G225800.6.p P. trichocarpa v3.1 122449211 Nonsense-mediated decay protein Upf3 1 5262 Malpighiales
Podel.04G230500.1.p P. deltoides WV94 v2.1 122449211 Nonsense-mediated decay protein Upf3 1 5262 Malpighiales