Protein Family : CCCH-type Zn-finger protein 122449219

Method ID:  5262 Method Name:  Malpighiales
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
27810.t000004 (1 of 3) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) R. communis v0.1 3982   27810: 27779-31760
27810.t000005 (1 of 3) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) R. communis v0.1 4379   27810: 56470-60848
Lus10019709.g (1 of 1) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 L. usitatissimum v1.0 3588   scaffold420: 446826-450413
SapurV1A.4681s0010 (1 of 3) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 S. purpurea v1.0 2698   Scaffold4681: 5084-7781
SapurV1A.0133s0380 (1 of 3) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 S. purpurea v1.0 4113   chr06: 3675551-3679663
SapurV1A.0027s0390 (1 of 2) PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 S. purpurea v1.0 3833   chr09: 4990295-4994127
SapurV1A.0037s0280 (1 of 8) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) S. purpurea v1.0 4641   chr09: 9703736-9708376
SapurV1A.0111s0230 (1 of 2) PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 S. purpurea v1.0 3945   chr16: 15004179-15008123
Manes.08G048800 (1 of 5) PTHR14493:SF22 - ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN M. esculenta v6.1 5330   Chromosome08: 4654019-4659348
Manes.07G006200 (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 M. esculenta v6.1 4388   Chromosome07: 779392-783779
Manes.10G142900 (1 of 5) PTHR14493:SF22 - ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN M. esculenta v6.1 4141   Chromosome10: 25486951-25491091
Potri.001G266700 (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 P. trichocarpa v3.1 3596   Chr01: 27464754-27468349
Potri.006G053800 (1 of 2) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 P. trichocarpa v3.1 4101   Chr06: 3923944-3928044
Potri.009G061000 (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 P. trichocarpa v3.1 4517   Chr09: 6303472-6307988
Potri.016G053700 (1 of 8) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) P. trichocarpa v3.1 5253   Chr16: 3479381-3484633
Podel.06G055500 (1 of 2) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 P. deltoides WV94 v2.1 4712   Chr06: 4097286-4101997
Podel.01G282600 (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 P. deltoides WV94 v2.1 4108   Chr01: 29009124-29013231
Podel.09G062800 (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 P. deltoides WV94 v2.1 3927   Chr09: 6331415-6335341

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
SapurV1A.0111s0230.1.p S. purpurea v1.0 122449219 CCCH-type Zn-finger protein 5 5262 Malpighiales
Manes.10G142900.1.p M. esculenta v6.1 122449219 CCCH-type Zn-finger protein 3 5262 Malpighiales
Potri.009G061000.5.p P. trichocarpa v3.1 122449219 CCCH-type Zn-finger protein 4 5262 Malpighiales
Podel.09G062800.1.p P. deltoides WV94 v2.1 122449219 CCCH-type Zn-finger protein 3 5262 Malpighiales
Podel.01G282600.1.p P. deltoides WV94 v2.1 122449219 CCCH-type Zn-finger protein 3 5262 Malpighiales
27810.m000634 R. communis v0.1 122449219 CCCH-type Zn-finger protein 2 5262 Malpighiales
27810.m000633 R. communis v0.1 122449219 CCCH-type Zn-finger protein 2 5262 Malpighiales
Lus10019709 L. usitatissimum v1.0 122449219 CCCH-type Zn-finger protein 1 5262 Malpighiales
SapurV1A.0037s0280.1.p S. purpurea v1.0 122449219 CCCH-type Zn-finger protein 5 5262 Malpighiales
SapurV1A.0027s0390.1.p S. purpurea v1.0 122449219 CCCH-type Zn-finger protein 5 5262 Malpighiales
SapurV1A.4681s0010.1.p S. purpurea v1.0 122449219 CCCH-type Zn-finger protein 5 5262 Malpighiales
SapurV1A.0133s0380.1.p S. purpurea v1.0 122449219 CCCH-type Zn-finger protein 5 5262 Malpighiales
Manes.07G006200.1.p M. esculenta v6.1 122449219 CCCH-type Zn-finger protein 3 5262 Malpighiales
Manes.08G048800.1.p M. esculenta v6.1 122449219 CCCH-type Zn-finger protein 3 5262 Malpighiales
Potri.016G053700.1.p P. trichocarpa v3.1 122449219 CCCH-type Zn-finger protein 4 5262 Malpighiales
Potri.006G053800.1.p P. trichocarpa v3.1 122449219 CCCH-type Zn-finger protein 4 5262 Malpighiales
Potri.001G266700.1.p P. trichocarpa v3.1 122449219 CCCH-type Zn-finger protein 4 5262 Malpighiales
Podel.06G055500.1.p P. deltoides WV94 v2.1 122449219 CCCH-type Zn-finger protein 3 5262 Malpighiales