Protein Family : MADS box transcription factor 122427122

Method ID:  5262 Method Name:  Malpighiales
Sequence Alignment:  View MSA Member Count:  27

27 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30147.t000404 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 R. communis v0.1 10678   30147: 484679-495356
30174.t000333 (1 of 1) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1806   30174: 1111635-1113440
30190.t000334 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 R. communis v0.1 2012   30190: 1795689-1797700
Lus10006715.g (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED L. usitatissimum v1.0 3556   scaffold2932: 239965-243520
Lus10014143.g (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED L. usitatissimum v1.0 3319   scaffold231: 27242-30560
Lus10041385.g (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN L. usitatissimum v1.0 1704   scaffold280: 2191958-2193661
Lus10036542.g (1 of 4) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 L. usitatissimum v1.0 1747   scaffold57: 1141490-1143236
SapurV1A.0400s0250 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 S. purpurea v1.0 4647   chr12: 13486496-13491142
SapurV1A.0578s0130 (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED S. purpurea v1.0 10834   chr14: 5147199-5158032
SapurV1A.0282s0240 (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED S. purpurea v1.0 8209   chr01: 7690945-7699153
SapurV1A.0024s0570 (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED S. purpurea v1.0 7330   chr02: 12457128-12464457
SapurV1A.0045s0580 (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED S. purpurea v1.0 7298   chr03: 10499581-10506878
Manes.06G141600 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 M. esculenta v6.1 4461   Chromosome06: 24655959-24660419
Manes.05G041900 (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN M. esculenta v6.1 8585   Chromosome05: 2978223-2986807
Manes.02G030100 (1 of 1) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED M. esculenta v6.1 7840   Chromosome02: 2268949-2276788
Manes.01G263500 (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN M. esculenta v6.1 5259   Chromosome01: 33581727-33586985
Manes.14G030800 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 M. esculenta v6.1 903   Chromosome14: 2519373-2520275
Potri.001G112400 (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED P. trichocarpa v3.1 13471   Chr01: 8978732-8992202
Potri.002G151700 (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED P. trichocarpa v3.1 9460   Chr02: 11437060-11446519
Potri.003G119700 (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED P. trichocarpa v3.1 6241   Chr03: 14225951-14232191
Potri.012G133000 (1 of 1) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 P. trichocarpa v3.1 4818   Chr12: 14970440-14975257
Potri.014G074200 (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED P. trichocarpa v3.1 9769   Chr14: 5981453-5991221
Podel.14G074800 (1 of 5) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED P. deltoides WV94 v2.1 11034   Chr14: 5511521-5522554
Podel.03G128100 (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED P. deltoides WV94 v2.1 7470   Chr03: 14356109-14363578
Podel.12G140600 (1 of 1) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 P. deltoides WV94 v2.1 4789   Chr12: 14670464-14675252
Podel.01G118800 (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED P. deltoides WV94 v2.1 12296   Chr01: 9562748-9575043
Podel.02G167800 (1 of 5) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED P. deltoides WV94 v2.1 9502   Chr02: 12609707-12619208

27 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30190.m011098 R. communis v0.1 122427122 MADS box transcription factor 3 5262 Malpighiales
Lus10006715 L. usitatissimum v1.0 122427122 MADS box transcription factor 4 5262 Malpighiales
Lus10036542 L. usitatissimum v1.0 122427122 MADS box transcription factor 4 5262 Malpighiales
SapurV1A.0024s0570.1.p S. purpurea v1.0 122427122 MADS box transcription factor 5 5262 Malpighiales
SapurV1A.0045s0580.1.p S. purpurea v1.0 122427122 MADS box transcription factor 5 5262 Malpighiales
Manes.02G030100.1.p M. esculenta v6.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Potri.012G133000.6.p P. trichocarpa v3.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Podel.02G167800.1.p P. deltoides WV94 v2.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Podel.01G118800.1.p P. deltoides WV94 v2.1 122427122 MADS box transcription factor 5 5262 Malpighiales
30174.m008936 R. communis v0.1 122427122 MADS box transcription factor 3 5262 Malpighiales
30147.m014133 R. communis v0.1 122427122 MADS box transcription factor 3 5262 Malpighiales
Lus10014143 L. usitatissimum v1.0 122427122 MADS box transcription factor 4 5262 Malpighiales
Lus10041385 L. usitatissimum v1.0 122427122 MADS box transcription factor 4 5262 Malpighiales
SapurV1A.0578s0130.1.p S. purpurea v1.0 122427122 MADS box transcription factor 5 5262 Malpighiales
SapurV1A.0400s0250.1.p S. purpurea v1.0 122427122 MADS box transcription factor 5 5262 Malpighiales
SapurV1A.0282s0240.1.p S. purpurea v1.0 122427122 MADS box transcription factor 5 5262 Malpighiales
Manes.05G041900.1.p M. esculenta v6.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Manes.14G030800.1.p M. esculenta v6.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Manes.06G141600.1.p M. esculenta v6.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Manes.01G263500.1.p M. esculenta v6.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Potri.003G119700.8.p P. trichocarpa v3.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Potri.001G112400.2.p P. trichocarpa v3.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Potri.002G151700.1.p P. trichocarpa v3.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Potri.014G074200.2.p P. trichocarpa v3.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Podel.03G128100.1.p P. deltoides WV94 v2.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Podel.12G140600.1.p P. deltoides WV94 v2.1 122427122 MADS box transcription factor 5 5262 Malpighiales
Podel.14G074800.1.p P. deltoides WV94 v2.1 122427122 MADS box transcription factor 5 5262 Malpighiales