Protein Family : PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 121861450

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  13

13 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Zm00008a039238 (1 of 34) PF00385 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) Z. mays PH207 v1.1 2031   chrUNKNOWN: 3725837-3727867
Zm00008a039281 (1 of 1) PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) Z. mays PH207 v1.1 2210   chrUNKNOWN: 4217637-4219846
Zm00008a039185 (1 of 197) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Z. mays PH207 v1.1 1496   chrUNKNOWN: 2839520-2841015
Zm00008a039385 (1 of 4) PF00078//PF13650 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Aspartyl protease (Asp_protease_2) Z. mays PH207 v1.1 1368   chrUNKNOWN: 4910073-4911440
Zm00008a039435 (1 of 197) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Z. mays PH207 v1.1 1724   chrUNKNOWN: 5303765-5305488
Zm00008a039450 (1 of 197) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Z. mays PH207 v1.1 960   chrUNKNOWN: 5451084-5452043
Zm00008a039132 (1 of 197) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Z. mays PH207 v1.1 682   chrUNKNOWN: 2435007-2435688
Zm00008a039133 (1 of 4) PF00078//PF13650 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Aspartyl protease (Asp_protease_2) Z. mays PH207 v1.1 1515   chrUNKNOWN: 2435809-2437323
Zm00008a039083 (1 of 197) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Z. mays PH207 v1.1 3774   chrUNKNOWN: 1036331-1040104
Zm00008a038944 (1 of 197) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Z. mays PH207 v1.1 1423   chrUNKNOWN: 138828-140250
Zm00008a038943 (1 of 197) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Z. mays PH207 v1.1 1847   chrUNKNOWN: 110546-112392
Zm00008a039420 (1 of 197) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Z. mays PH207 v1.1 1235   chrUNKNOWN: 5220808-5222042
Zm00008a039416 (1 of 4) PF00078//PF13650 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Aspartyl protease (Asp_protease_2) Z. mays PH207 v1.1 1257   chrUNKNOWN: 5166291-5167547

13 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Zm00008a039435_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039238_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039385_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039420_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a038944_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039450_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039133_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039083_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039132_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a038943_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039281_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039416_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm
Zm00008a039185_P01 Z. mays PH207 v1.1 121861450 PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) 13 5273 Angiosperm