Gene : Carub.0004s0343 C. rubella v1.1
Defline:  (1 of 1) PTHR10766//PTHR10766:SF37 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // ENDOMEMBRANE PROTEIN 70 FAMILY PROTEIN Genomic Order:  343
Name:  ? Carub.0004s0343 Secondary Identifier:  ? PAC:39239114
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0343 0.5kb upstream 0.5kb upstream 3127 true scaffold_4: 1531459-1534585 Capsella rubella
Carub.0004s0343 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1534086-1534585 Capsella rubella
Carub.0004s0343 0.5kb downstream 0.5kb downstream 3127 true scaffold_4: 1530959-1534085 Capsella rubella
Carub.0004s0343 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1530959-1531458 Capsella rubella
Carub.0004s0343 1.0kb upstream 1.0kb upstream 3627 true scaffold_4: 1531459-1535085 Capsella rubella
Carub.0004s0343 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1534086-1535085 Capsella rubella
Carub.0004s0343 1.0kb downstream 1.0kb downstream 3627 true scaffold_4: 1530459-1534085 Capsella rubella
Carub.0004s0343 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1530459-1531458 Capsella rubella
Carub.0004s0343 2.0kb upstream 2.0kb upstream 4627 true scaffold_4: 1531459-1536085 Capsella rubella
Carub.0004s0343 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1534086-1536085 Capsella rubella
Carub.0004s0343 2.0kb downstream 2.0kb downstream 4627 true scaffold_4: 1529459-1534085 Capsella rubella
Carub.0004s0343 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1529459-1531458 Capsella rubella
Carub.0004s0343 5.0kb upstream 5.0kb upstream 7627 true scaffold_4: 1531459-1539085 Capsella rubella
Carub.0004s0343 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1534086-1539085 Capsella rubella
Carub.0004s0343 5.0kb downstream 5.0kb downstream 7627 true scaffold_4: 1526459-1534085 Capsella rubella
Carub.0004s0343 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1526459-1531458 Capsella rubella
Carub.0004s0343 10.0kb upstream 10.0kb upstream 12627 true scaffold_4: 1531459-1544085 Capsella rubella
Carub.0004s0343 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1534086-1544085 Capsella rubella
Carub.0004s0343 10.0kb downstream 10.0kb downstream 12627 true scaffold_4: 1521459-1534085 Capsella rubella
Carub.0004s0343 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1521459-1531458 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363418 5261 Brassicaceae View MSA
123827659 5264 Brassicales-Malvales View MSA
124346696 5266 SBM View MSA
124245782 5268 Malvidae View MSA
124068307 5270 Rosid View MSA
123742579 5271 Pentapetalae View MSA
122788087 5272 Eudicot View MSA
122049863 5273 Angiosperm View MSA
121348852 5274 Embryophyte View MSA
123425843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain