Gene : Carub.0004s0401 C. rubella v1.1

Defline:  (1 of 6) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Genomic Order:  401
Name:  ? Carub.0004s0401 Secondary Identifier:  ? PAC:39236103

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0401 0.5kb upstream 0.5kb upstream 2837 true scaffold_4: 1838969-1841805 Capsella rubella
Carub.0004s0401 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1838969-1839468 Capsella rubella
Carub.0004s0401 0.5kb downstream 0.5kb downstream 2837 true scaffold_4: 1839469-1842305 Capsella rubella
Carub.0004s0401 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1841806-1842305 Capsella rubella
Carub.0004s0401 1.0kb upstream 1.0kb upstream 3337 true scaffold_4: 1838469-1841805 Capsella rubella
Carub.0004s0401 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1838469-1839468 Capsella rubella
Carub.0004s0401 1.0kb downstream 1.0kb downstream 3337 true scaffold_4: 1839469-1842805 Capsella rubella
Carub.0004s0401 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1841806-1842805 Capsella rubella
Carub.0004s0401 2.0kb upstream 2.0kb upstream 4337 true scaffold_4: 1837469-1841805 Capsella rubella
Carub.0004s0401 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1837469-1839468 Capsella rubella
Carub.0004s0401 2.0kb downstream 2.0kb downstream 4337 true scaffold_4: 1839469-1843805 Capsella rubella
Carub.0004s0401 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1841806-1843805 Capsella rubella
Carub.0004s0401 5.0kb upstream 5.0kb upstream 7337 true scaffold_4: 1834469-1841805 Capsella rubella
Carub.0004s0401 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1834469-1839468 Capsella rubella
Carub.0004s0401 5.0kb downstream 5.0kb downstream 7337 true scaffold_4: 1839469-1846805 Capsella rubella
Carub.0004s0401 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1841806-1846805 Capsella rubella
Carub.0004s0401 10.0kb upstream 10.0kb upstream 12337 true scaffold_4: 1829469-1841805 Capsella rubella
Carub.0004s0401 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1829469-1839468 Capsella rubella
Carub.0004s0401 10.0kb downstream 10.0kb downstream 12337 true scaffold_4: 1839469-1851805 Capsella rubella
Carub.0004s0401 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1841806-1851805 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370195 5261 Brassicaceae View MSA
123837145 5264 Brassicales-Malvales View MSA
124339653 5266 SBM View MSA
124250665 5268 Malvidae View MSA
124069927 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain