Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 123428073

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  532

532 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29742.t000007 (1 of 2) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) R. communis v0.1 2396   29742: 32409-34804
29805.t000058 (1 of 3) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) R. communis v0.1 3995   29805: 266667-270661
29848.t000031 (1 of 1) PTHR23147//PTHR23147:SF1 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED R. communis v0.1 3273   29848: 150087-153359
30147.t000579 (1 of 2) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) R. communis v0.1 3094   30147: 383559-386652
28610.t000004 (1 of 3) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) R. communis v0.1 3473   28610: 8492-11964
Cucsa.042460 (1 of 5) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. sativus v1.0 11321   scaffold00540: 853254-864574
Cucsa.259460 (1 of 5) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. sativus v1.0 3570   scaffold02229: 5940055-5943624
Cucsa.285940 (1 of 6) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) C. sativus v1.0 4264   scaffold02653: 2166866-2171129
Cucsa.311100 (1 of 1) PTHR23147//PTHR23147:SF1 - SERINE/ARGININE RICH SPLICING FACTOR C. sativus v1.0 4435   scaffold02995: 755869-760303
orange1.1g021599m.g (1 of 4) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) C. sinensis v1.1 3343   scaffold00024: 1192802-1196144
orange1.1g046599m.g (1 of 7) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) C. sinensis v1.1 2301   scaffold00025: 527004-529304
orange1.1g014331m.g (1 of 3) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. sinensis v1.1 4681   scaffold00062: 359781-364461
orange1.1g024354m.g (1 of 3) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. sinensis v1.1 3415   scaffold00001: 3052371-3055785
AT3G61860 (1 of 4) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) A. thaliana TAIR10 2328   Chr3: 22900068-22902395
AT4G25500 (1 of 4) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) A. thaliana TAIR10 2914   Chr4: 13024571-13027484
AT4G31580 (1 of 5) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) A. thaliana TAIR10 1694   Chr4: 15306654-15308347
AT5G52040 (1 of 4) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) A. thaliana TAIR10 3302   Chr5: 21130320-21133621
AT3G53500 (1 of 5) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) A. thaliana TAIR10 2746   Chr3: 19834343-19837088
AT1G23860 (1 of 5) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) A. thaliana TAIR10 2143   Chr1: 8427356-8429498
AT2G24590 (1 of 5) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) A. thaliana TAIR10 1554   Chr2: 10449631-10451184
AT2G37340 (1 of 1) KOG0114//KOG4207 - Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily A. thaliana TAIR10 2554   Chr2: 15670147-15672700
AT2G46610 (1 of 1) PTHR24012//PTHR24012:SF374 - FAMILY NOT NAMED // SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNIZED BY T-CELLS 3 A. thaliana TAIR10 2197   Chr2: 19136566-19138762
Thhalv10026315m.g (1 of 10) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) E. salsugineum v1.0 1636   scaffold_1: 3574097-3575732
Thhalv10017989m.g (1 of 6) KOG0114 - Predicted RNA-binding protein (RRM superfamily) E. salsugineum v1.0 2475   scaffold_10: 9173160-9175634
Thhalv10000328m.g (1 of 2) PTHR23147//PTHR23147:SF1 - SERINE/ARGININE RICH SPLICING FACTOR E. salsugineum v1.0 2544   scaffold_15: 3596965-3599508
Thhalv10010597m.g (1 of 10) PTHR23147 - SERINE/ARGININE RICH SPLICING FACTOR E. salsugineum v1.0 3113   scaffold_16: 1060633-1063745
Thhalv10014293m.g (1 of 4) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) E. salsugineum v1.0 3566   scaffold_2: 12828303-12831868
Thhalv10014414m.g (1 of 2) PTHR23147//PTHR23147:SF1 - SERINE/ARGININE RICH SPLICING FACTOR E. salsugineum v1.0 2525   scaffold_2: 609674-612198
Thhalv10001540m.g (1 of 4) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) E. salsugineum v1.0 3230   scaffold_22: 1285646-1288875
Thhalv10008869m.g (1 of 10) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) E. salsugineum v1.0 2083   scaffold_5: 6956981-6959063

532 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30147.m014308 R. communis v0.1 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5275 Viridiplantae
29742.m001371 R. communis v0.1 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5275 Viridiplantae
29805.m001527 R. communis v0.1 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5275 Viridiplantae
29848.m004475 R. communis v0.1 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5275 Viridiplantae
28610.m000073 R. communis v0.1 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5275 Viridiplantae
Cucsa.285940.1 C. sativus v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5275 Viridiplantae
Cucsa.042460.1 C. sativus v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5275 Viridiplantae
Cucsa.259460.1 C. sativus v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5275 Viridiplantae
Cucsa.311100.1 C. sativus v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5275 Viridiplantae
orange1.1g024354m C. sinensis v1.1 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5275 Viridiplantae
orange1.1g021599m C. sinensis v1.1 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5275 Viridiplantae
orange1.1g046599m C. sinensis v1.1 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5275 Viridiplantae
orange1.1g014331m C. sinensis v1.1 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5275 Viridiplantae
AT3G61860.1 A. thaliana TAIR10 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 9 5275 Viridiplantae
AT4G25500.1 A. thaliana TAIR10 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 9 5275 Viridiplantae
AT4G31580.1 A. thaliana TAIR10 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 9 5275 Viridiplantae
AT5G52040.2 A. thaliana TAIR10 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 9 5275 Viridiplantae
AT3G53500.2 A. thaliana TAIR10 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 9 5275 Viridiplantae
AT1G23860.1 A. thaliana TAIR10 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 9 5275 Viridiplantae
AT2G24590.1 A. thaliana TAIR10 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 9 5275 Viridiplantae
AT2G37340.1 A. thaliana TAIR10 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 9 5275 Viridiplantae
AT2G46610.1 A. thaliana TAIR10 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 9 5275 Viridiplantae
Thhalv10008869m E. salsugineum v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 8 5275 Viridiplantae
Thhalv10026315m E. salsugineum v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 8 5275 Viridiplantae
Thhalv10017989m E. salsugineum v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 8 5275 Viridiplantae
Thhalv10000328m E. salsugineum v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 8 5275 Viridiplantae
Thhalv10010597m E. salsugineum v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 8 5275 Viridiplantae
Thhalv10014293m E. salsugineum v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 8 5275 Viridiplantae
Thhalv10014414m E. salsugineum v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 8 5275 Viridiplantae
Thhalv10001540m E. salsugineum v1.0 123428073 RNA-binding (RRM/RBD/RNP motifs) family protein 8 5275 Viridiplantae