Gene : AT3G61860 A. thaliana TAIR10
Defline:  (1 of 4) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) Genomic Order:  5260
Name:  ? AT3G61860 Secondary Identifier:  ? PAC:19662734
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61860 0.5kb upstream 0.5kb upstream 2828 true Chr3: 22900068-22902895 Arabidopsis thaliana
AT3G61860 0.5kb upstream 0.5kb upstream 500 false Chr3: 22902396-22902895 Arabidopsis thaliana
AT3G61860 0.5kb downstream 0.5kb downstream 2828 true Chr3: 22899568-22902395 Arabidopsis thaliana
AT3G61860 0.5kb downstream 0.5kb downstream 500 false Chr3: 22899568-22900067 Arabidopsis thaliana
AT3G61860 1.0kb upstream 1.0kb upstream 3328 true Chr3: 22900068-22903395 Arabidopsis thaliana
AT3G61860 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22902396-22903395 Arabidopsis thaliana
AT3G61860 1.0kb downstream 1.0kb downstream 3328 true Chr3: 22899068-22902395 Arabidopsis thaliana
AT3G61860 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22899068-22900067 Arabidopsis thaliana
AT3G61860 2.0kb upstream 2.0kb upstream 4328 true Chr3: 22900068-22904395 Arabidopsis thaliana
AT3G61860 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22902396-22904395 Arabidopsis thaliana
AT3G61860 2.0kb downstream 2.0kb downstream 4328 true Chr3: 22898068-22902395 Arabidopsis thaliana
AT3G61860 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22898068-22900067 Arabidopsis thaliana
AT3G61860 5.0kb upstream 5.0kb upstream 7328 true Chr3: 22900068-22907395 Arabidopsis thaliana
AT3G61860 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22902396-22907395 Arabidopsis thaliana
AT3G61860 5.0kb downstream 5.0kb downstream 7328 true Chr3: 22895068-22902395 Arabidopsis thaliana
AT3G61860 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22895068-22900067 Arabidopsis thaliana
AT3G61860 10.0kb upstream 10.0kb upstream 12328 true Chr3: 22900068-22912395 Arabidopsis thaliana
AT3G61860 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22902396-22912395 Arabidopsis thaliana
AT3G61860 10.0kb downstream 10.0kb downstream 12328 true Chr3: 22890068-22902395 Arabidopsis thaliana
AT3G61860 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22890068-22900067 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343220 5261 Brassicaceae View MSA
123838781 5264 Brassicales-Malvales View MSA
124340469 5266 SBM View MSA
124251066 5268 Malvidae View MSA
124069321 5270 Rosid View MSA
123751972 5271 Pentapetalae View MSA
122797642 5272 Eudicot View MSA
122042700 5273 Angiosperm View MSA
121346873 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.559        
cufflinks 38.501     High High
cufflinks 18.262       Low
cufflinks 37.96     High High
cufflinks 20.042        
cufflinks 26.392        

0 Strain