Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 124069321

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  93

93 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29742.t000007 (1 of 2) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) R. communis v0.1 2396   29742: 32409-34804
30147.t000579 (1 of 2) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) R. communis v0.1 3094   30147: 383559-386652
Cucsa.042460 (1 of 5) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. sativus v1.0 11321   scaffold00540: 853254-864574
Cucsa.259460 (1 of 5) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. sativus v1.0 3570   scaffold02229: 5940055-5943624
orange1.1g014331m.g (1 of 3) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. sinensis v1.1 4681   scaffold00062: 359781-364461
orange1.1g024354m.g (1 of 3) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. sinensis v1.1 3415   scaffold00001: 3052371-3055785
AT3G61860 (1 of 4) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) A. thaliana TAIR10 2328   Chr3: 22900068-22902395
AT4G25500 (1 of 4) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) A. thaliana TAIR10 2914   Chr4: 13024571-13027484
AT5G52040 (1 of 4) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) A. thaliana TAIR10 3302   Chr5: 21130320-21133621
AT2G46610 (1 of 1) PTHR24012//PTHR24012:SF374 - FAMILY NOT NAMED // SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNIZED BY T-CELLS 3 A. thaliana TAIR10 2197   Chr2: 19136566-19138762
Thhalv10014293m.g (1 of 4) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) E. salsugineum v1.0 3566   scaffold_2: 12828303-12831868
Thhalv10001540m.g (1 of 4) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) E. salsugineum v1.0 3230   scaffold_22: 1285646-1288875
Ciclev10021673m.g (1 of 3) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. clementina v1.0 3412   scaffold_3: 47908878-47912289
Ciclev10005021m.g (1 of 3) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. clementina v1.0 4156   scaffold_9: 28608335-28612490
Lus10005986.g (1 of 11) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) L. usitatissimum v1.0 1615   scaffold114: 113804-115418
Lus10030226.g (1 of 11) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) L. usitatissimum v1.0 1670   scaffold217: 319221-320890
Lus10038883.g (1 of 11) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) L. usitatissimum v1.0 2260   scaffold34: 682347-684606
Gorai.004G044100 (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) G. raimondii v2.1 3397   Chr04: 3845832-3849228
Gorai.008G280300 (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) G. raimondii v2.1 4153   Chr08: 55732554-55736706
Gorai.008G127200 (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) G. raimondii v2.1 2430   Chr08: 36835914-36838343
Thecc1EG005096 (1 of 2) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) T. cacao v1.1 3370   scaffold_1: 35027423-35030792
Thecc1EG015090 (1 of 2) K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) T. cacao v1.1 4283   scaffold_3: 26150200-26154482
Araha.3284s0017 (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) A. halleri v1.1 2122   Scaffold3284: 86833-88954
Araha.7206s0004 (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) A. halleri v1.1 2263   Scaffold7206: 26646-28908
Araha.15933s0002 (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) A. halleri v1.1 3148   Scaffold15933: 5583-8730
Cagra.0094s0015 (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. grandiflora v1.1 3214   Scaffold94: 43057-46270
Cagra.0483s0059 (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. grandiflora v1.1 2340   Scaffold483: 206195-208534
Cagra.23907s0017 (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) C. grandiflora v1.1 2942   Scaffold23907: 65088-68029
Glyma.07G053200 (1 of 14) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) G. max Wm82.a2.v1 3212   Chr07: 4664115-4667326
Glyma.07G078300 (1 of 14) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) G. max Wm82.a2.v1 3679   Chr07: 7150800-7154478

93 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.042460.1 C. sativus v1.0 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Cucsa.259460.1 C. sativus v1.0 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Lus10038883 L. usitatissimum v1.0 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Lus10030226 L. usitatissimum v1.0 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Lus10005986 L. usitatissimum v1.0 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Gorai.008G280300.1 G. raimondii v2.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Thecc1EG015090t1 T. cacao v1.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Cagra.0094s0015.1.p C. grandiflora v1.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Glyma.07G078300.1.p G. max Wm82.a2.v1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5270 Rosid
Brara.E00118.1.p B. rapa FPsc v1.3 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Bostr.15774s0351.1.p B. stricta v1.2 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Bostr.25993s0104.1.p B. stricta v1.2 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Bostr.13158s0189.1.p B. stricta v1.2 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Medtr8g027190.1 M. truncatula Mt4.0v1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Medtr1g101520.1 M. truncatula Mt4.0v1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
SapurV1A.0003s0840.1.p S. purpurea v1.0 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5270 Rosid
Eucgr.E00030.1.p E. grandis v2.0 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Eucgr.D02239.1.p E. grandis v2.0 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Manes.01G243200.1.p M. esculenta v6.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Tp57577_TGAC_v2_mRNA18023 T. pratense v2 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Tp57577_TGAC_v2_mRNA16438 T. pratense v2 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Phvul.010G116100.2.p P. vulgaris v2.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Phvul.010G092200.1.p P. vulgaris v2.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Potri.002G175000.2.p P. trichocarpa v3.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Potri.014G076600.2.p P. trichocarpa v3.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Podel.02G194900.1.p P. deltoides WV94 v2.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
VIT_215s0046g00050.4 V. vinifera v2.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
VIT_215s0048g01870.7 V. vinifera v2.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Carub.0007s1549.1.p C. rubella v1.1 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Ca_04500 C. arietinum v1.0 124069321 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid