Gene : Glyma.07G078300 G. max Wm82.a2.v1
Defline:  (1 of 14) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) Genomic Order:  783
Name:  ? Glyma.07G078300 Secondary Identifier:  ? PAC:30491472
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G078300 0.5kb upstream 0.5kb upstream 4179 true Chr07: 7150800-7154978 Glycine max
Glyma.07G078300 0.5kb upstream 0.5kb upstream 500 false Chr07: 7154479-7154978 Glycine max
Glyma.07G078300 0.5kb downstream 0.5kb downstream 4179 true Chr07: 7150300-7154478 Glycine max
Glyma.07G078300 0.5kb downstream 0.5kb downstream 500 false Chr07: 7150300-7150799 Glycine max
Glyma.07G078300 1.0kb upstream 1.0kb upstream 4679 true Chr07: 7150800-7155478 Glycine max
Glyma.07G078300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7154479-7155478 Glycine max
Glyma.07G078300 1.0kb downstream 1.0kb downstream 4679 true Chr07: 7149800-7154478 Glycine max
Glyma.07G078300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7149800-7150799 Glycine max
Glyma.07G078300 2.0kb upstream 2.0kb upstream 5679 true Chr07: 7150800-7156478 Glycine max
Glyma.07G078300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7154479-7156478 Glycine max
Glyma.07G078300 2.0kb downstream 2.0kb downstream 5679 true Chr07: 7148800-7154478 Glycine max
Glyma.07G078300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7148800-7150799 Glycine max
Glyma.07G078300 5.0kb upstream 5.0kb upstream 8679 true Chr07: 7150800-7159478 Glycine max
Glyma.07G078300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7154479-7159478 Glycine max
Glyma.07G078300 5.0kb downstream 5.0kb downstream 8679 true Chr07: 7145800-7154478 Glycine max
Glyma.07G078300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7145800-7150799 Glycine max
Glyma.07G078300 10.0kb upstream 10.0kb upstream 13679 true Chr07: 7150800-7164478 Glycine max
Glyma.07G078300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7154479-7164478 Glycine max
Glyma.07G078300 10.0kb downstream 10.0kb downstream 13679 true Chr07: 7140800-7154478 Glycine max
Glyma.07G078300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7140800-7150799 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300309 5265 Fabidae View MSA
124069321 5270 Rosid View MSA
123751972 5271 Pentapetalae View MSA
122797642 5272 Eudicot View MSA
122042700 5273 Angiosperm View MSA
121346873 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.4747 0.0 126.834 High  
cufflinks 38.5018 0.0 186.096 High  
cufflinks 38.2152 0.0 189.125 High  
cufflinks 29.01 0.0 142.359 High  
cufflinks 28.466 0.0 133.674 High  
cufflinks 26.046 0.0 119.037 High  
cufflinks 76.1794 0.0 403.663 High High
cufflinks 25.823 0.0 121.682 High  
cufflinks 24.8151 0.0 116.094 High  
cufflinks 1.482       Low
cufflinks 6.678     High High
cufflinks 1.695       Low
cufflinks 1.787        
cufflinks 2.087        
cufflinks 6.714     High High
cufflinks 2.837        
cufflinks 1.976        
cufflinks 1.736       Low
cufflinks 2.902        
cufflinks 3.163        
cufflinks 5.056       High
cufflinks 2.948        
cufflinks 2.163        
cufflinks 5.26       High
cufflinks 2.99        
cufflinks 3.048        

0 Strain