Gene : Araha.7206s0004 A. halleri v1.1

Defline:  (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) Genomic Order:  4
Name:  ? Araha.7206s0004 Secondary Identifier:  ? PAC:28858323

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7206s0004 0.5kb upstream 0.5kb upstream 2763 true Scaffold7206: 26146-28908 Arabidopsis halleri
Araha.7206s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold7206: 26146-26645 Arabidopsis halleri
Araha.7206s0004 0.5kb downstream 0.5kb downstream 2763 true Scaffold7206: 26646-29408 Arabidopsis halleri
Araha.7206s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold7206: 28909-29408 Arabidopsis halleri
Araha.7206s0004 1.0kb upstream 1.0kb upstream 3263 true Scaffold7206: 25646-28908 Arabidopsis halleri
Araha.7206s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold7206: 25646-26645 Arabidopsis halleri
Araha.7206s0004 1.0kb downstream 1.0kb downstream 3263 true Scaffold7206: 26646-29908 Arabidopsis halleri
Araha.7206s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold7206: 28909-29908 Arabidopsis halleri
Araha.7206s0004 2.0kb upstream 2.0kb upstream 4263 true Scaffold7206: 24646-28908 Arabidopsis halleri
Araha.7206s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold7206: 24646-26645 Arabidopsis halleri
Araha.7206s0004 2.0kb downstream 2.0kb downstream 4263 true Scaffold7206: 26646-30908 Arabidopsis halleri
Araha.7206s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold7206: 28909-30908 Arabidopsis halleri
Araha.7206s0004 5.0kb upstream 5.0kb upstream 7263 true Scaffold7206: 21646-28908 Arabidopsis halleri
Araha.7206s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold7206: 21646-26645 Arabidopsis halleri
Araha.7206s0004 5.0kb downstream 5.0kb downstream 7263 true Scaffold7206: 26646-33908 Arabidopsis halleri
Araha.7206s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold7206: 28909-33908 Arabidopsis halleri
Araha.7206s0004 10.0kb upstream 10.0kb upstream 12263 true Scaffold7206: 16646-28908 Arabidopsis halleri
Araha.7206s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold7206: 16646-26645 Arabidopsis halleri
Araha.7206s0004 10.0kb downstream 10.0kb downstream 12263 true Scaffold7206: 26646-38908 Arabidopsis halleri
Araha.7206s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold7206: 28909-38908 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343220 5261 Brassicaceae View MSA
123838781 5264 Brassicales-Malvales View MSA
124340469 5266 SBM View MSA
124251066 5268 Malvidae View MSA
124069321 5270 Rosid View MSA
123751972 5271 Pentapetalae View MSA
122797642 5272 Eudicot View MSA
122042700 5273 Angiosperm View MSA
121346873 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain