Gene : Cagra.0094s0015 C. grandiflora v1.1
Defline:  (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) Genomic Order:  15
Name:  ? Cagra.0094s0015 Secondary Identifier:  ? PAC:28912380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0094s0015 0.5kb upstream 0.5kb upstream 3714 true Scaffold94: 42557-46270 Capsella grandiflora
Cagra.0094s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold94: 42557-43056 Capsella grandiflora
Cagra.0094s0015 0.5kb downstream 0.5kb downstream 3714 true Scaffold94: 43057-46770 Capsella grandiflora
Cagra.0094s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold94: 46271-46770 Capsella grandiflora
Cagra.0094s0015 1.0kb upstream 1.0kb upstream 4214 true Scaffold94: 42057-46270 Capsella grandiflora
Cagra.0094s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold94: 42057-43056 Capsella grandiflora
Cagra.0094s0015 1.0kb downstream 1.0kb downstream 4214 true Scaffold94: 43057-47270 Capsella grandiflora
Cagra.0094s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold94: 46271-47270 Capsella grandiflora
Cagra.0094s0015 2.0kb upstream 2.0kb upstream 5214 true Scaffold94: 41057-46270 Capsella grandiflora
Cagra.0094s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold94: 41057-43056 Capsella grandiflora
Cagra.0094s0015 2.0kb downstream 2.0kb downstream 5214 true Scaffold94: 43057-48270 Capsella grandiflora
Cagra.0094s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold94: 46271-48270 Capsella grandiflora
Cagra.0094s0015 5.0kb upstream 5.0kb upstream 8214 true Scaffold94: 38057-46270 Capsella grandiflora
Cagra.0094s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold94: 38057-43056 Capsella grandiflora
Cagra.0094s0015 5.0kb downstream 5.0kb downstream 8214 true Scaffold94: 43057-51270 Capsella grandiflora
Cagra.0094s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold94: 46271-51270 Capsella grandiflora
Cagra.0094s0015 10.0kb upstream 10.0kb upstream 13214 true Scaffold94: 33057-46270 Capsella grandiflora
Cagra.0094s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold94: 33057-43056 Capsella grandiflora
Cagra.0094s0015 10.0kb downstream 10.0kb downstream 13214 true Scaffold94: 43057-56270 Capsella grandiflora
Cagra.0094s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold94: 46271-56270 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377174 5261 Brassicaceae View MSA
123835857 5264 Brassicales-Malvales View MSA
124337153 5266 SBM View MSA
124238846 5268 Malvidae View MSA
124069321 5270 Rosid View MSA
123751972 5271 Pentapetalae View MSA
122797642 5272 Eudicot View MSA
122042700 5273 Angiosperm View MSA
121346873 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain