Gene : Cagra.23907s0017 C. grandiflora v1.1
Defline:  (1 of 6) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) Genomic Order:  17
Name:  ? Cagra.23907s0017 Secondary Identifier:  ? PAC:28913577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.23907s0017 0.5kb upstream 0.5kb upstream 3442 true Scaffold23907: 65088-68529 Capsella grandiflora
Cagra.23907s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold23907: 68030-68529 Capsella grandiflora
Cagra.23907s0017 0.5kb downstream 0.5kb downstream 3442 true Scaffold23907: 64588-68029 Capsella grandiflora
Cagra.23907s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold23907: 64588-65087 Capsella grandiflora
Cagra.23907s0017 1.0kb upstream 1.0kb upstream 3942 true Scaffold23907: 65088-69029 Capsella grandiflora
Cagra.23907s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold23907: 68030-69029 Capsella grandiflora
Cagra.23907s0017 1.0kb downstream 1.0kb downstream 3942 true Scaffold23907: 64088-68029 Capsella grandiflora
Cagra.23907s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold23907: 64088-65087 Capsella grandiflora
Cagra.23907s0017 2.0kb upstream 2.0kb upstream 4942 true Scaffold23907: 65088-70029 Capsella grandiflora
Cagra.23907s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold23907: 68030-70029 Capsella grandiflora
Cagra.23907s0017 2.0kb downstream 2.0kb downstream 4942 true Scaffold23907: 63088-68029 Capsella grandiflora
Cagra.23907s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold23907: 63088-65087 Capsella grandiflora
Cagra.23907s0017 5.0kb upstream 5.0kb upstream 5626 true Scaffold23907: 65088-70713 Capsella grandiflora
Cagra.23907s0017 5.0kb upstream 5.0kb upstream 2684 false Scaffold23907: 68030-70713 Capsella grandiflora
Cagra.23907s0017 5.0kb downstream 5.0kb downstream 7942 true Scaffold23907: 60088-68029 Capsella grandiflora
Cagra.23907s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold23907: 60088-65087 Capsella grandiflora
Cagra.23907s0017 10.0kb upstream 10.0kb upstream 5626 true Scaffold23907: 65088-70713 Capsella grandiflora
Cagra.23907s0017 10.0kb upstream 10.0kb upstream 2684 false Scaffold23907: 68030-70713 Capsella grandiflora
Cagra.23907s0017 10.0kb downstream 10.0kb downstream 12942 true Scaffold23907: 55088-68029 Capsella grandiflora
Cagra.23907s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold23907: 55088-65087 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366707 5261 Brassicaceae View MSA
123835857 5264 Brassicales-Malvales View MSA
124337153 5266 SBM View MSA
124238846 5268 Malvidae View MSA
124069321 5270 Rosid View MSA
123751972 5271 Pentapetalae View MSA
122797642 5272 Eudicot View MSA
122042700 5273 Angiosperm View MSA
121346873 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain