Gene : Carub.0004s0721 C. rubella v1.1

Defline:  (1 of 1) K11886 - proteasome component ECM29 (ECM29) Genomic Order:  721
Name:  ? Carub.0004s0721 Secondary Identifier:  ? PAC:39236285

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0721 0.5kb upstream 0.5kb upstream 14144 true scaffold_4: 5399791-5413934 Capsella rubella
Carub.0004s0721 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 5399791-5400290 Capsella rubella
Carub.0004s0721 0.5kb downstream 0.5kb downstream 14144 true scaffold_4: 5400291-5414434 Capsella rubella
Carub.0004s0721 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 5413935-5414434 Capsella rubella
Carub.0004s0721 1.0kb upstream 1.0kb upstream 14644 true scaffold_4: 5399291-5413934 Capsella rubella
Carub.0004s0721 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 5399291-5400290 Capsella rubella
Carub.0004s0721 1.0kb downstream 1.0kb downstream 14644 true scaffold_4: 5400291-5414934 Capsella rubella
Carub.0004s0721 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 5413935-5414934 Capsella rubella
Carub.0004s0721 2.0kb upstream 2.0kb upstream 15644 true scaffold_4: 5398291-5413934 Capsella rubella
Carub.0004s0721 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 5398291-5400290 Capsella rubella
Carub.0004s0721 2.0kb downstream 2.0kb downstream 15644 true scaffold_4: 5400291-5415934 Capsella rubella
Carub.0004s0721 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 5413935-5415934 Capsella rubella
Carub.0004s0721 5.0kb upstream 5.0kb upstream 18644 true scaffold_4: 5395291-5413934 Capsella rubella
Carub.0004s0721 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 5395291-5400290 Capsella rubella
Carub.0004s0721 5.0kb downstream 5.0kb downstream 18644 true scaffold_4: 5400291-5418934 Capsella rubella
Carub.0004s0721 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 5413935-5418934 Capsella rubella
Carub.0004s0721 10.0kb upstream 10.0kb upstream 23644 true scaffold_4: 5390291-5413934 Capsella rubella
Carub.0004s0721 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 5390291-5400290 Capsella rubella
Carub.0004s0721 10.0kb downstream 10.0kb downstream 23644 true scaffold_4: 5400291-5423934 Capsella rubella
Carub.0004s0721 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 5413935-5423934 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372003 5261 Brassicaceae View MSA
123828879 5264 Brassicales-Malvales View MSA
124339532 5266 SBM View MSA
124239075 5268 Malvidae View MSA
124060426 5270 Rosid View MSA
123740160 5271 Pentapetalae View MSA
122788135 5272 Eudicot View MSA
122042594 5273 Angiosperm View MSA
121344548 5274 Embryophyte View MSA
123425052 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain