Gene : Carub.0004s0565 C. rubella v1.1
Defline:  (1 of 1) PTHR12532:SF0 - TRANSCRIPTIONAL REGULATORY PROTEIN HAH1-RELATED Genomic Order:  565
Name:  ? Carub.0004s0565 Secondary Identifier:  ? PAC:39238789
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0565 0.5kb upstream 0.5kb upstream 3213 true scaffold_4: 2693417-2696629 Capsella rubella
Carub.0004s0565 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2696130-2696629 Capsella rubella
Carub.0004s0565 0.5kb downstream 0.5kb downstream 3213 true scaffold_4: 2692917-2696129 Capsella rubella
Carub.0004s0565 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2692917-2693416 Capsella rubella
Carub.0004s0565 1.0kb upstream 1.0kb upstream 3713 true scaffold_4: 2693417-2697129 Capsella rubella
Carub.0004s0565 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2696130-2697129 Capsella rubella
Carub.0004s0565 1.0kb downstream 1.0kb downstream 3713 true scaffold_4: 2692417-2696129 Capsella rubella
Carub.0004s0565 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2692417-2693416 Capsella rubella
Carub.0004s0565 2.0kb upstream 2.0kb upstream 4713 true scaffold_4: 2693417-2698129 Capsella rubella
Carub.0004s0565 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2696130-2698129 Capsella rubella
Carub.0004s0565 2.0kb downstream 2.0kb downstream 4713 true scaffold_4: 2691417-2696129 Capsella rubella
Carub.0004s0565 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2691417-2693416 Capsella rubella
Carub.0004s0565 5.0kb upstream 5.0kb upstream 7713 true scaffold_4: 2693417-2701129 Capsella rubella
Carub.0004s0565 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2696130-2701129 Capsella rubella
Carub.0004s0565 5.0kb downstream 5.0kb downstream 7713 true scaffold_4: 2688417-2696129 Capsella rubella
Carub.0004s0565 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2688417-2693416 Capsella rubella
Carub.0004s0565 10.0kb upstream 10.0kb upstream 12713 true scaffold_4: 2693417-2706129 Capsella rubella
Carub.0004s0565 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2696130-2706129 Capsella rubella
Carub.0004s0565 10.0kb downstream 10.0kb downstream 12713 true scaffold_4: 2683417-2696129 Capsella rubella
Carub.0004s0565 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2683417-2693416 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368422 5261 Brassicaceae View MSA
123833652 5264 Brassicales-Malvales View MSA
124338879 5266 SBM View MSA
124238175 5268 Malvidae View MSA
124060394 5270 Rosid View MSA
123737611 5271 Pentapetalae View MSA
122791742 5272 Eudicot View MSA
122042716 5273 Angiosperm View MSA
121345418 5274 Embryophyte View MSA
123424346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain