Gene : Carub.0004s0857 C. rubella v1.1
Defline:  (1 of 1) PTHR11119//PTHR11119:SF28 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // NUCLEOBASE-ASCORBATE TRANSPORTER 12 Genomic Order:  857
Name:  ? Carub.0004s0857 Secondary Identifier:  ? PAC:39238334
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0857 0.5kb upstream 0.5kb upstream 4728 true scaffold_4: 6231001-6235728 Capsella rubella
Carub.0004s0857 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 6231001-6231500 Capsella rubella
Carub.0004s0857 0.5kb downstream 0.5kb downstream 4728 true scaffold_4: 6231501-6236228 Capsella rubella
Carub.0004s0857 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 6235729-6236228 Capsella rubella
Carub.0004s0857 1.0kb upstream 1.0kb upstream 5228 true scaffold_4: 6230501-6235728 Capsella rubella
Carub.0004s0857 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 6230501-6231500 Capsella rubella
Carub.0004s0857 1.0kb downstream 1.0kb downstream 5228 true scaffold_4: 6231501-6236728 Capsella rubella
Carub.0004s0857 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 6235729-6236728 Capsella rubella
Carub.0004s0857 2.0kb upstream 2.0kb upstream 6228 true scaffold_4: 6229501-6235728 Capsella rubella
Carub.0004s0857 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 6229501-6231500 Capsella rubella
Carub.0004s0857 2.0kb downstream 2.0kb downstream 6228 true scaffold_4: 6231501-6237728 Capsella rubella
Carub.0004s0857 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 6235729-6237728 Capsella rubella
Carub.0004s0857 5.0kb upstream 5.0kb upstream 9228 true scaffold_4: 6226501-6235728 Capsella rubella
Carub.0004s0857 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 6226501-6231500 Capsella rubella
Carub.0004s0857 5.0kb downstream 5.0kb downstream 9228 true scaffold_4: 6231501-6240728 Capsella rubella
Carub.0004s0857 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 6235729-6240728 Capsella rubella
Carub.0004s0857 10.0kb upstream 10.0kb upstream 14228 true scaffold_4: 6221501-6235728 Capsella rubella
Carub.0004s0857 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 6221501-6231500 Capsella rubella
Carub.0004s0857 10.0kb downstream 10.0kb downstream 14228 true scaffold_4: 6231501-6245728 Capsella rubella
Carub.0004s0857 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 6235729-6245728 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367279 5261 Brassicaceae View MSA
123834943 5264 Brassicales-Malvales View MSA
124336995 5266 SBM View MSA
124251327 5268 Malvidae View MSA
124074779 5270 Rosid View MSA
123742744 5271 Pentapetalae View MSA
122788188 5272 Eudicot View MSA
122046196 5273 Angiosperm View MSA
121347942 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain