Gene : Carub.0004s0799 C. rubella v1.1
Defline:  (1 of 4) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  799
Name:  ? Carub.0004s0799 Secondary Identifier:  ? PAC:39238390
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0799 0.5kb upstream 0.5kb upstream 1629 true scaffold_4: 5989802-5991430 Capsella rubella
Carub.0004s0799 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 5990931-5991430 Capsella rubella
Carub.0004s0799 0.5kb downstream 0.5kb downstream 1629 true scaffold_4: 5989302-5990930 Capsella rubella
Carub.0004s0799 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 5989302-5989801 Capsella rubella
Carub.0004s0799 1.0kb upstream 1.0kb upstream 2129 true scaffold_4: 5989802-5991930 Capsella rubella
Carub.0004s0799 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 5990931-5991930 Capsella rubella
Carub.0004s0799 1.0kb downstream 1.0kb downstream 2129 true scaffold_4: 5988802-5990930 Capsella rubella
Carub.0004s0799 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 5988802-5989801 Capsella rubella
Carub.0004s0799 2.0kb upstream 2.0kb upstream 3129 true scaffold_4: 5989802-5992930 Capsella rubella
Carub.0004s0799 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 5990931-5992930 Capsella rubella
Carub.0004s0799 2.0kb downstream 2.0kb downstream 3129 true scaffold_4: 5987802-5990930 Capsella rubella
Carub.0004s0799 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 5987802-5989801 Capsella rubella
Carub.0004s0799 5.0kb upstream 5.0kb upstream 6129 true scaffold_4: 5989802-5995930 Capsella rubella
Carub.0004s0799 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 5990931-5995930 Capsella rubella
Carub.0004s0799 5.0kb downstream 5.0kb downstream 6129 true scaffold_4: 5984802-5990930 Capsella rubella
Carub.0004s0799 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 5984802-5989801 Capsella rubella
Carub.0004s0799 10.0kb upstream 10.0kb upstream 11129 true scaffold_4: 5989802-6000930 Capsella rubella
Carub.0004s0799 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 5990931-6000930 Capsella rubella
Carub.0004s0799 10.0kb downstream 10.0kb downstream 11129 true scaffold_4: 5979802-5990930 Capsella rubella
Carub.0004s0799 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 5979802-5989801 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366827 5261 Brassicaceae View MSA
123837381 5264 Brassicales-Malvales View MSA
124343898 5266 SBM View MSA
124240358 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain