Gene : Carub.0004s1186 C. rubella v1.1

Defline:  (1 of 16) PF04576 - Zein-binding (Zein-binding) Genomic Order:  1186
Name:  ? Carub.0004s1186 Secondary Identifier:  ? PAC:39237924

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1186 0.5kb upstream 0.5kb upstream 2875 true scaffold_4: 7792205-7795079 Capsella rubella
Carub.0004s1186 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7792205-7792704 Capsella rubella
Carub.0004s1186 0.5kb downstream 0.5kb downstream 2875 true scaffold_4: 7792705-7795579 Capsella rubella
Carub.0004s1186 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7795080-7795579 Capsella rubella
Carub.0004s1186 1.0kb upstream 1.0kb upstream 3375 true scaffold_4: 7791705-7795079 Capsella rubella
Carub.0004s1186 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7791705-7792704 Capsella rubella
Carub.0004s1186 1.0kb downstream 1.0kb downstream 3375 true scaffold_4: 7792705-7796079 Capsella rubella
Carub.0004s1186 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7795080-7796079 Capsella rubella
Carub.0004s1186 2.0kb upstream 2.0kb upstream 4375 true scaffold_4: 7790705-7795079 Capsella rubella
Carub.0004s1186 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7790705-7792704 Capsella rubella
Carub.0004s1186 2.0kb downstream 2.0kb downstream 4375 true scaffold_4: 7792705-7797079 Capsella rubella
Carub.0004s1186 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7795080-7797079 Capsella rubella
Carub.0004s1186 5.0kb upstream 5.0kb upstream 7375 true scaffold_4: 7787705-7795079 Capsella rubella
Carub.0004s1186 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7787705-7792704 Capsella rubella
Carub.0004s1186 5.0kb downstream 5.0kb downstream 7375 true scaffold_4: 7792705-7800079 Capsella rubella
Carub.0004s1186 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7795080-7800079 Capsella rubella
Carub.0004s1186 10.0kb upstream 10.0kb upstream 12375 true scaffold_4: 7782705-7795079 Capsella rubella
Carub.0004s1186 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7782705-7792704 Capsella rubella
Carub.0004s1186 10.0kb downstream 10.0kb downstream 12375 true scaffold_4: 7792705-7805079 Capsella rubella
Carub.0004s1186 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7795080-7805079 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375963 5261 Brassicaceae View MSA
123838989 5264 Brassicales-Malvales View MSA
124350144 5266 SBM View MSA
124251951 5268 Malvidae View MSA
124071861 5270 Rosid View MSA
123744785 5271 Pentapetalae View MSA
122794145 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain