Gene : Carub.0004s0981 C. rubella v1.1
Defline:  (1 of 1) PTHR12220 - 50S/60S RIBOSOMAL PROTEIN L16 Genomic Order:  981
Name:  ? Carub.0004s0981 Secondary Identifier:  ? PAC:39236809
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0981 0.5kb upstream 0.5kb upstream 2180 true scaffold_4: 6955147-6957326 Capsella rubella
Carub.0004s0981 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 6956827-6957326 Capsella rubella
Carub.0004s0981 0.5kb downstream 0.5kb downstream 2180 true scaffold_4: 6954647-6956826 Capsella rubella
Carub.0004s0981 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 6954647-6955146 Capsella rubella
Carub.0004s0981 1.0kb upstream 1.0kb upstream 2680 true scaffold_4: 6955147-6957826 Capsella rubella
Carub.0004s0981 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 6956827-6957826 Capsella rubella
Carub.0004s0981 1.0kb downstream 1.0kb downstream 2680 true scaffold_4: 6954147-6956826 Capsella rubella
Carub.0004s0981 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 6954147-6955146 Capsella rubella
Carub.0004s0981 2.0kb upstream 2.0kb upstream 3680 true scaffold_4: 6955147-6958826 Capsella rubella
Carub.0004s0981 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 6956827-6958826 Capsella rubella
Carub.0004s0981 2.0kb downstream 2.0kb downstream 3680 true scaffold_4: 6953147-6956826 Capsella rubella
Carub.0004s0981 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 6953147-6955146 Capsella rubella
Carub.0004s0981 5.0kb upstream 5.0kb upstream 6680 true scaffold_4: 6955147-6961826 Capsella rubella
Carub.0004s0981 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 6956827-6961826 Capsella rubella
Carub.0004s0981 5.0kb downstream 5.0kb downstream 6680 true scaffold_4: 6950147-6956826 Capsella rubella
Carub.0004s0981 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 6950147-6955146 Capsella rubella
Carub.0004s0981 10.0kb upstream 10.0kb upstream 11680 true scaffold_4: 6955147-6966826 Capsella rubella
Carub.0004s0981 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 6956827-6966826 Capsella rubella
Carub.0004s0981 10.0kb downstream 10.0kb downstream 11680 true scaffold_4: 6945147-6956826 Capsella rubella
Carub.0004s0981 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 6945147-6955146 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377942 5261 Brassicaceae View MSA
123801680 5264 Brassicales-Malvales View MSA
124298956 5266 SBM View MSA
124150485 5268 Malvidae View MSA
123876086 5270 Rosid View MSA
123746840 5271 Pentapetalae View MSA
122794950 5272 Eudicot View MSA
122041743 5273 Angiosperm View MSA
123429161 5275 Viridiplantae View MSA
121350825 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain