Gene : Carub.0004s1009 C. rubella v1.1
Defline:  (1 of 1) PTHR24286:SF86 - ABSCISIC ACID 8'-HYDROXYLASE 2 Genomic Order:  1009
Name:  ? Carub.0004s1009 Secondary Identifier:  ? PAC:39237153
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5271 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1009 0.5kb upstream 0.5kb upstream 4120 true scaffold_4: 7106043-7110162 Capsella rubella
Carub.0004s1009 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7109663-7110162 Capsella rubella
Carub.0004s1009 0.5kb downstream 0.5kb downstream 4120 true scaffold_4: 7105543-7109662 Capsella rubella
Carub.0004s1009 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7105543-7106042 Capsella rubella
Carub.0004s1009 1.0kb upstream 1.0kb upstream 4620 true scaffold_4: 7106043-7110662 Capsella rubella
Carub.0004s1009 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7109663-7110662 Capsella rubella
Carub.0004s1009 1.0kb downstream 1.0kb downstream 4620 true scaffold_4: 7105043-7109662 Capsella rubella
Carub.0004s1009 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7105043-7106042 Capsella rubella
Carub.0004s1009 2.0kb upstream 2.0kb upstream 5620 true scaffold_4: 7106043-7111662 Capsella rubella
Carub.0004s1009 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7109663-7111662 Capsella rubella
Carub.0004s1009 2.0kb downstream 2.0kb downstream 5620 true scaffold_4: 7104043-7109662 Capsella rubella
Carub.0004s1009 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7104043-7106042 Capsella rubella
Carub.0004s1009 5.0kb upstream 5.0kb upstream 8620 true scaffold_4: 7106043-7114662 Capsella rubella
Carub.0004s1009 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7109663-7114662 Capsella rubella
Carub.0004s1009 5.0kb downstream 5.0kb downstream 8620 true scaffold_4: 7101043-7109662 Capsella rubella
Carub.0004s1009 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7101043-7106042 Capsella rubella
Carub.0004s1009 10.0kb upstream 10.0kb upstream 13620 true scaffold_4: 7106043-7119662 Capsella rubella
Carub.0004s1009 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7109663-7119662 Capsella rubella
Carub.0004s1009 10.0kb downstream 10.0kb downstream 13620 true scaffold_4: 7096043-7109662 Capsella rubella
Carub.0004s1009 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7096043-7106042 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372552 5261 Brassicaceae View MSA
123831515 5264 Brassicales-Malvales View MSA
124341542 5266 SBM View MSA
124242424 5268 Malvidae View MSA
124067645 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain