Gene : Carub.0004s1065 C. rubella v1.1
Defline:  (1 of 1) PTHR21660//PTHR21660:SF8 - THIOESTERASE SUPERFAMILY MEMBER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1065
Name:  ? Carub.0004s1065 Secondary Identifier:  ? PAC:39236092
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1121 Capsella rubella pathologic  
Crubella PWY-321 Capsella rubella pathologic  
Crubella PWY-5148 Capsella rubella pathologic  
Crubella PWY-6733 Capsella rubella pathologic  
Crubella PWY-735 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1065 0.5kb upstream 0.5kb upstream 1706 true scaffold_4: 7269217-7270922 Capsella rubella
Carub.0004s1065 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7270423-7270922 Capsella rubella
Carub.0004s1065 0.5kb downstream 0.5kb downstream 1706 true scaffold_4: 7268717-7270422 Capsella rubella
Carub.0004s1065 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7268717-7269216 Capsella rubella
Carub.0004s1065 1.0kb upstream 1.0kb upstream 2206 true scaffold_4: 7269217-7271422 Capsella rubella
Carub.0004s1065 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7270423-7271422 Capsella rubella
Carub.0004s1065 1.0kb downstream 1.0kb downstream 2206 true scaffold_4: 7268217-7270422 Capsella rubella
Carub.0004s1065 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7268217-7269216 Capsella rubella
Carub.0004s1065 2.0kb upstream 2.0kb upstream 3206 true scaffold_4: 7269217-7272422 Capsella rubella
Carub.0004s1065 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7270423-7272422 Capsella rubella
Carub.0004s1065 2.0kb downstream 2.0kb downstream 3206 true scaffold_4: 7267217-7270422 Capsella rubella
Carub.0004s1065 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7267217-7269216 Capsella rubella
Carub.0004s1065 5.0kb upstream 5.0kb upstream 6206 true scaffold_4: 7269217-7275422 Capsella rubella
Carub.0004s1065 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7270423-7275422 Capsella rubella
Carub.0004s1065 5.0kb downstream 5.0kb downstream 6206 true scaffold_4: 7264217-7270422 Capsella rubella
Carub.0004s1065 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7264217-7269216 Capsella rubella
Carub.0004s1065 10.0kb upstream 10.0kb upstream 11206 true scaffold_4: 7269217-7280422 Capsella rubella
Carub.0004s1065 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7270423-7280422 Capsella rubella
Carub.0004s1065 10.0kb downstream 10.0kb downstream 11206 true scaffold_4: 7259217-7270422 Capsella rubella
Carub.0004s1065 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7259217-7269216 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370510 5261 Brassicaceae View MSA
123835425 5264 Brassicales-Malvales View MSA
124342263 5266 SBM View MSA
124242669 5268 Malvidae View MSA
124068313 5270 Rosid View MSA
123746035 5271 Pentapetalae View MSA
122788849 5272 Eudicot View MSA
122042394 5273 Angiosperm View MSA
121309957 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain