Gene : Carub.0004s1374 C. rubella v1.1
Defline:  (1 of 2) PTHR18966//PTHR18966:SF190 - IONOTROPIC GLUTAMATE RECEPTOR // GLUTAMATE RECEPTOR 3.4-RELATED Genomic Order:  1374
Name:  ? Carub.0004s1374 Secondary Identifier:  ? PAC:39238719
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1374 0.5kb upstream 0.5kb upstream 4082 true scaffold_4: 8533779-8537860 Capsella rubella
Carub.0004s1374 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8537361-8537860 Capsella rubella
Carub.0004s1374 0.5kb downstream 0.5kb downstream 4082 true scaffold_4: 8533279-8537360 Capsella rubella
Carub.0004s1374 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8533279-8533778 Capsella rubella
Carub.0004s1374 1.0kb upstream 1.0kb upstream 4582 true scaffold_4: 8533779-8538360 Capsella rubella
Carub.0004s1374 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8537361-8538360 Capsella rubella
Carub.0004s1374 1.0kb downstream 1.0kb downstream 4582 true scaffold_4: 8532779-8537360 Capsella rubella
Carub.0004s1374 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8532779-8533778 Capsella rubella
Carub.0004s1374 2.0kb upstream 2.0kb upstream 5582 true scaffold_4: 8533779-8539360 Capsella rubella
Carub.0004s1374 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8537361-8539360 Capsella rubella
Carub.0004s1374 2.0kb downstream 2.0kb downstream 5582 true scaffold_4: 8531779-8537360 Capsella rubella
Carub.0004s1374 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8531779-8533778 Capsella rubella
Carub.0004s1374 5.0kb upstream 5.0kb upstream 8582 true scaffold_4: 8533779-8542360 Capsella rubella
Carub.0004s1374 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8537361-8542360 Capsella rubella
Carub.0004s1374 5.0kb downstream 5.0kb downstream 8582 true scaffold_4: 8528779-8537360 Capsella rubella
Carub.0004s1374 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8528779-8533778 Capsella rubella
Carub.0004s1374 10.0kb upstream 10.0kb upstream 13582 true scaffold_4: 8533779-8547360 Capsella rubella
Carub.0004s1374 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8537361-8547360 Capsella rubella
Carub.0004s1374 10.0kb downstream 10.0kb downstream 13582 true scaffold_4: 8523779-8537360 Capsella rubella
Carub.0004s1374 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8523779-8533778 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368007 5261 Brassicaceae View MSA
123799467 5264 Brassicales-Malvales View MSA
124296985 5266 SBM View MSA
124244155 5268 Malvidae View MSA
124064754 5270 Rosid View MSA
123739557 5271 Pentapetalae View MSA
122789775 5272 Eudicot View MSA
122045646 5273 Angiosperm View MSA
121348236 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain