Gene : Carub.0004s1223 C. rubella v1.1
Defline:  (1 of 3) PTHR10972//PTHR10972:SF67 - OXYSTEROL-BINDING PROTEIN-RELATED // OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D Genomic Order:  1223
Name:  ? Carub.0004s1223 Secondary Identifier:  ? PAC:39236658
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1223 0.5kb upstream 0.5kb upstream 3710 true scaffold_4: 7959988-7963697 Capsella rubella
Carub.0004s1223 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7959988-7960487 Capsella rubella
Carub.0004s1223 0.5kb downstream 0.5kb downstream 3710 true scaffold_4: 7960488-7964197 Capsella rubella
Carub.0004s1223 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7963698-7964197 Capsella rubella
Carub.0004s1223 1.0kb upstream 1.0kb upstream 4210 true scaffold_4: 7959488-7963697 Capsella rubella
Carub.0004s1223 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7959488-7960487 Capsella rubella
Carub.0004s1223 1.0kb downstream 1.0kb downstream 4210 true scaffold_4: 7960488-7964697 Capsella rubella
Carub.0004s1223 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7963698-7964697 Capsella rubella
Carub.0004s1223 2.0kb upstream 2.0kb upstream 5210 true scaffold_4: 7958488-7963697 Capsella rubella
Carub.0004s1223 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7958488-7960487 Capsella rubella
Carub.0004s1223 2.0kb downstream 2.0kb downstream 5210 true scaffold_4: 7960488-7965697 Capsella rubella
Carub.0004s1223 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7963698-7965697 Capsella rubella
Carub.0004s1223 5.0kb upstream 5.0kb upstream 8210 true scaffold_4: 7955488-7963697 Capsella rubella
Carub.0004s1223 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7955488-7960487 Capsella rubella
Carub.0004s1223 5.0kb downstream 5.0kb downstream 8210 true scaffold_4: 7960488-7968697 Capsella rubella
Carub.0004s1223 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7963698-7968697 Capsella rubella
Carub.0004s1223 10.0kb upstream 10.0kb upstream 13210 true scaffold_4: 7950488-7963697 Capsella rubella
Carub.0004s1223 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7950488-7960487 Capsella rubella
Carub.0004s1223 10.0kb downstream 10.0kb downstream 13210 true scaffold_4: 7960488-7973697 Capsella rubella
Carub.0004s1223 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7963698-7973697 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122343172 5261 Brassicaceae View MSA
123783455 5264 Brassicales-Malvales View MSA
124281688 5266 SBM View MSA
124136404 5268 Malvidae View MSA
123864271 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain