Gene : Carub.0004s1268 C. rubella v1.1

Defline:  (1 of 7) K00507 - stearoyl-CoA desaturase (delta-9 desaturase) (SCD, desC) Genomic Order:  1268
Name:  ? Carub.0004s1268 Secondary Identifier:  ? PAC:39237014

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1268 0.5kb upstream 0.5kb upstream 2287 true scaffold_4: 8152960-8155246 Capsella rubella
Carub.0004s1268 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8154747-8155246 Capsella rubella
Carub.0004s1268 0.5kb downstream 0.5kb downstream 2287 true scaffold_4: 8152460-8154746 Capsella rubella
Carub.0004s1268 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8152460-8152959 Capsella rubella
Carub.0004s1268 1.0kb upstream 1.0kb upstream 2787 true scaffold_4: 8152960-8155746 Capsella rubella
Carub.0004s1268 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8154747-8155746 Capsella rubella
Carub.0004s1268 1.0kb downstream 1.0kb downstream 2787 true scaffold_4: 8151960-8154746 Capsella rubella
Carub.0004s1268 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8151960-8152959 Capsella rubella
Carub.0004s1268 2.0kb upstream 2.0kb upstream 3787 true scaffold_4: 8152960-8156746 Capsella rubella
Carub.0004s1268 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8154747-8156746 Capsella rubella
Carub.0004s1268 2.0kb downstream 2.0kb downstream 3787 true scaffold_4: 8150960-8154746 Capsella rubella
Carub.0004s1268 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8150960-8152959 Capsella rubella
Carub.0004s1268 5.0kb upstream 5.0kb upstream 6787 true scaffold_4: 8152960-8159746 Capsella rubella
Carub.0004s1268 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8154747-8159746 Capsella rubella
Carub.0004s1268 5.0kb downstream 5.0kb downstream 6787 true scaffold_4: 8147960-8154746 Capsella rubella
Carub.0004s1268 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8147960-8152959 Capsella rubella
Carub.0004s1268 10.0kb upstream 10.0kb upstream 11787 true scaffold_4: 8152960-8164746 Capsella rubella
Carub.0004s1268 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8154747-8164746 Capsella rubella
Carub.0004s1268 10.0kb downstream 10.0kb downstream 11787 true scaffold_4: 8142960-8154746 Capsella rubella
Carub.0004s1268 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8142960-8152959 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783348 5273 Angiosperm View MSA
122365337 5261 Brassicaceae View MSA
123798933 5264 Brassicales-Malvales View MSA
124296505 5266 SBM View MSA
124148637 5268 Malvidae View MSA
124041746 5270 Rosid View MSA
123754837 5271 Pentapetalae View MSA
122776165 5272 Eudicot View MSA
121054823 5274 Embryophyte View MSA
123094784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain