Gene : Carub.0004s1286 C. rubella v1.1
Defline:  (1 of 13) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  1286
Name:  ? Carub.0004s1286 Secondary Identifier:  ? PAC:39236607
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1286 0.5kb upstream 0.5kb upstream 1936 true scaffold_4: 8208930-8210865 Capsella rubella
Carub.0004s1286 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8208930-8209429 Capsella rubella
Carub.0004s1286 0.5kb downstream 0.5kb downstream 1936 true scaffold_4: 8209430-8211365 Capsella rubella
Carub.0004s1286 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8210866-8211365 Capsella rubella
Carub.0004s1286 1.0kb upstream 1.0kb upstream 2436 true scaffold_4: 8208430-8210865 Capsella rubella
Carub.0004s1286 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8208430-8209429 Capsella rubella
Carub.0004s1286 1.0kb downstream 1.0kb downstream 2436 true scaffold_4: 8209430-8211865 Capsella rubella
Carub.0004s1286 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8210866-8211865 Capsella rubella
Carub.0004s1286 2.0kb upstream 2.0kb upstream 3436 true scaffold_4: 8207430-8210865 Capsella rubella
Carub.0004s1286 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8207430-8209429 Capsella rubella
Carub.0004s1286 2.0kb downstream 2.0kb downstream 3436 true scaffold_4: 8209430-8212865 Capsella rubella
Carub.0004s1286 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8210866-8212865 Capsella rubella
Carub.0004s1286 5.0kb upstream 5.0kb upstream 6436 true scaffold_4: 8204430-8210865 Capsella rubella
Carub.0004s1286 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8204430-8209429 Capsella rubella
Carub.0004s1286 5.0kb downstream 5.0kb downstream 6436 true scaffold_4: 8209430-8215865 Capsella rubella
Carub.0004s1286 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8210866-8215865 Capsella rubella
Carub.0004s1286 10.0kb upstream 10.0kb upstream 11436 true scaffold_4: 8199430-8210865 Capsella rubella
Carub.0004s1286 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8199430-8209429 Capsella rubella
Carub.0004s1286 10.0kb downstream 10.0kb downstream 11436 true scaffold_4: 8209430-8220865 Capsella rubella
Carub.0004s1286 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8210866-8220865 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377649 5261 Brassicaceae View MSA
123837386 5264 Brassicales-Malvales View MSA
124350178 5266 SBM View MSA
124242501 5268 Malvidae View MSA
124067258 5270 Rosid View MSA
123744509 5271 Pentapetalae View MSA
122793651 5272 Eudicot View MSA
122045124 5273 Angiosperm View MSA
121348379 5274 Embryophyte View MSA
123380837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain