Gene : Carub.0004s1297 C. rubella v1.1
Defline:  (1 of 5) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Genomic Order:  1297
Name:  ? Carub.0004s1297 Secondary Identifier:  ? PAC:39237109
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1297 0.5kb upstream 0.5kb upstream 1725 true scaffold_4: 8255329-8257053 Capsella rubella
Carub.0004s1297 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8256554-8257053 Capsella rubella
Carub.0004s1297 0.5kb downstream 0.5kb downstream 1725 true scaffold_4: 8254829-8256553 Capsella rubella
Carub.0004s1297 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8254829-8255328 Capsella rubella
Carub.0004s1297 1.0kb upstream 1.0kb upstream 2225 true scaffold_4: 8255329-8257553 Capsella rubella
Carub.0004s1297 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8256554-8257553 Capsella rubella
Carub.0004s1297 1.0kb downstream 1.0kb downstream 2225 true scaffold_4: 8254329-8256553 Capsella rubella
Carub.0004s1297 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8254329-8255328 Capsella rubella
Carub.0004s1297 2.0kb upstream 2.0kb upstream 3225 true scaffold_4: 8255329-8258553 Capsella rubella
Carub.0004s1297 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8256554-8258553 Capsella rubella
Carub.0004s1297 2.0kb downstream 2.0kb downstream 3225 true scaffold_4: 8253329-8256553 Capsella rubella
Carub.0004s1297 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8253329-8255328 Capsella rubella
Carub.0004s1297 5.0kb upstream 5.0kb upstream 6225 true scaffold_4: 8255329-8261553 Capsella rubella
Carub.0004s1297 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8256554-8261553 Capsella rubella
Carub.0004s1297 5.0kb downstream 5.0kb downstream 6225 true scaffold_4: 8250329-8256553 Capsella rubella
Carub.0004s1297 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8250329-8255328 Capsella rubella
Carub.0004s1297 10.0kb upstream 10.0kb upstream 11225 true scaffold_4: 8255329-8266553 Capsella rubella
Carub.0004s1297 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8256554-8266553 Capsella rubella
Carub.0004s1297 10.0kb downstream 10.0kb downstream 11225 true scaffold_4: 8245329-8256553 Capsella rubella
Carub.0004s1297 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8245329-8255328 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363083 5261 Brassicaceae View MSA
123830145 5264 Brassicales-Malvales View MSA
124343977 5266 SBM View MSA
124238875 5268 Malvidae View MSA
124064751 5270 Rosid View MSA
123737427 5271 Pentapetalae View MSA
122789103 5272 Eudicot View MSA
122048000 5273 Angiosperm View MSA
121347460 5274 Embryophyte View MSA
123380557 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain