Gene : Carub.0004s1538 C. rubella v1.1

Defline:  (1 of 1) K03926 - periplasmic divalent cation tolerance protein (cutA) Genomic Order:  1538
Name:  ? Carub.0004s1538 Secondary Identifier:  ? PAC:39237294

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1538 0.5kb upstream 0.5kb upstream 2467 true scaffold_4: 9169709-9172175 Capsella rubella
Carub.0004s1538 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9169709-9170208 Capsella rubella
Carub.0004s1538 0.5kb downstream 0.5kb downstream 2467 true scaffold_4: 9170209-9172675 Capsella rubella
Carub.0004s1538 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9172176-9172675 Capsella rubella
Carub.0004s1538 1.0kb upstream 1.0kb upstream 2967 true scaffold_4: 9169209-9172175 Capsella rubella
Carub.0004s1538 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9169209-9170208 Capsella rubella
Carub.0004s1538 1.0kb downstream 1.0kb downstream 2967 true scaffold_4: 9170209-9173175 Capsella rubella
Carub.0004s1538 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9172176-9173175 Capsella rubella
Carub.0004s1538 2.0kb upstream 2.0kb upstream 3967 true scaffold_4: 9168209-9172175 Capsella rubella
Carub.0004s1538 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9168209-9170208 Capsella rubella
Carub.0004s1538 2.0kb downstream 2.0kb downstream 3967 true scaffold_4: 9170209-9174175 Capsella rubella
Carub.0004s1538 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9172176-9174175 Capsella rubella
Carub.0004s1538 5.0kb upstream 5.0kb upstream 6967 true scaffold_4: 9165209-9172175 Capsella rubella
Carub.0004s1538 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9165209-9170208 Capsella rubella
Carub.0004s1538 5.0kb downstream 5.0kb downstream 6967 true scaffold_4: 9170209-9177175 Capsella rubella
Carub.0004s1538 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9172176-9177175 Capsella rubella
Carub.0004s1538 10.0kb upstream 10.0kb upstream 11967 true scaffold_4: 9160209-9172175 Capsella rubella
Carub.0004s1538 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9160209-9170208 Capsella rubella
Carub.0004s1538 10.0kb downstream 10.0kb downstream 11967 true scaffold_4: 9170209-9182175 Capsella rubella
Carub.0004s1538 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9172176-9182175 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371930 5261 Brassicaceae View MSA
123829348 5264 Brassicales-Malvales View MSA
124346066 5266 SBM View MSA
124240619 5268 Malvidae View MSA
124065132 5270 Rosid View MSA
123737980 5271 Pentapetalae View MSA
122793088 5272 Eudicot View MSA
122046469 5273 Angiosperm View MSA
121350937 5274 Embryophyte View MSA
123425667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain