Gene : Carub.0004s1537 C. rubella v1.1

Defline:  (1 of 128) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  1537
Name:  ? Carub.0004s1537 Secondary Identifier:  ? PAC:39237360

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1537 0.5kb upstream 0.5kb upstream 1875 true scaffold_4: 9168660-9170534 Capsella rubella
Carub.0004s1537 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9170035-9170534 Capsella rubella
Carub.0004s1537 0.5kb downstream 0.5kb downstream 1875 true scaffold_4: 9168160-9170034 Capsella rubella
Carub.0004s1537 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9168160-9168659 Capsella rubella
Carub.0004s1537 1.0kb upstream 1.0kb upstream 2375 true scaffold_4: 9168660-9171034 Capsella rubella
Carub.0004s1537 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9170035-9171034 Capsella rubella
Carub.0004s1537 1.0kb downstream 1.0kb downstream 2375 true scaffold_4: 9167660-9170034 Capsella rubella
Carub.0004s1537 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9167660-9168659 Capsella rubella
Carub.0004s1537 2.0kb upstream 2.0kb upstream 3375 true scaffold_4: 9168660-9172034 Capsella rubella
Carub.0004s1537 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9170035-9172034 Capsella rubella
Carub.0004s1537 2.0kb downstream 2.0kb downstream 3375 true scaffold_4: 9166660-9170034 Capsella rubella
Carub.0004s1537 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9166660-9168659 Capsella rubella
Carub.0004s1537 5.0kb upstream 5.0kb upstream 6375 true scaffold_4: 9168660-9175034 Capsella rubella
Carub.0004s1537 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9170035-9175034 Capsella rubella
Carub.0004s1537 5.0kb downstream 5.0kb downstream 6375 true scaffold_4: 9163660-9170034 Capsella rubella
Carub.0004s1537 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9163660-9168659 Capsella rubella
Carub.0004s1537 10.0kb upstream 10.0kb upstream 11375 true scaffold_4: 9168660-9180034 Capsella rubella
Carub.0004s1537 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9170035-9180034 Capsella rubella
Carub.0004s1537 10.0kb downstream 10.0kb downstream 11375 true scaffold_4: 9158660-9170034 Capsella rubella
Carub.0004s1537 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9158660-9168659 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364741 5261 Brassicaceae View MSA
123798820 5264 Brassicales-Malvales View MSA
124350916 5266 SBM View MSA
124244564 5268 Malvidae View MSA
124074105 5270 Rosid View MSA
123739419 5271 Pentapetalae View MSA
122790289 5272 Eudicot View MSA
122050043 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349167 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain