Gene : Carub.0004s1578 C. rubella v1.1
Defline:  (1 of 5) PTHR12902 - WASP-1 Genomic Order:  1578
Name:  ? Carub.0004s1578 Secondary Identifier:  ? PAC:39236125
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1578 0.5kb upstream 0.5kb upstream 4613 true scaffold_4: 9337895-9342507 Capsella rubella
Carub.0004s1578 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9342008-9342507 Capsella rubella
Carub.0004s1578 0.5kb downstream 0.5kb downstream 4613 true scaffold_4: 9337395-9342007 Capsella rubella
Carub.0004s1578 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9337395-9337894 Capsella rubella
Carub.0004s1578 1.0kb upstream 1.0kb upstream 5113 true scaffold_4: 9337895-9343007 Capsella rubella
Carub.0004s1578 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9342008-9343007 Capsella rubella
Carub.0004s1578 1.0kb downstream 1.0kb downstream 5113 true scaffold_4: 9336895-9342007 Capsella rubella
Carub.0004s1578 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9336895-9337894 Capsella rubella
Carub.0004s1578 2.0kb upstream 2.0kb upstream 6113 true scaffold_4: 9337895-9344007 Capsella rubella
Carub.0004s1578 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9342008-9344007 Capsella rubella
Carub.0004s1578 2.0kb downstream 2.0kb downstream 6113 true scaffold_4: 9335895-9342007 Capsella rubella
Carub.0004s1578 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9335895-9337894 Capsella rubella
Carub.0004s1578 5.0kb upstream 5.0kb upstream 9113 true scaffold_4: 9337895-9347007 Capsella rubella
Carub.0004s1578 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9342008-9347007 Capsella rubella
Carub.0004s1578 5.0kb downstream 5.0kb downstream 9113 true scaffold_4: 9332895-9342007 Capsella rubella
Carub.0004s1578 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9332895-9337894 Capsella rubella
Carub.0004s1578 10.0kb upstream 10.0kb upstream 14113 true scaffold_4: 9337895-9352007 Capsella rubella
Carub.0004s1578 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9342008-9352007 Capsella rubella
Carub.0004s1578 10.0kb downstream 10.0kb downstream 14113 true scaffold_4: 9327895-9342007 Capsella rubella
Carub.0004s1578 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9327895-9337894 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375965 5261 Brassicaceae View MSA
123840663 5264 Brassicales-Malvales View MSA
124343545 5266 SBM View MSA
124253729 5268 Malvidae View MSA
124060592 5270 Rosid View MSA
123744362 5271 Pentapetalae View MSA
122797754 5272 Eudicot View MSA
122043443 5273 Angiosperm View MSA
121351143 5274 Embryophyte View MSA
123382024 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain