Gene : Carub.0004s1582 C. rubella v1.1

Defline:  (1 of 1) PTHR11119//PTHR11119:SF47 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  1582
Name:  ? Carub.0004s1582 Secondary Identifier:  ? PAC:39238842

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1582 0.5kb upstream 0.5kb upstream 3221 true scaffold_4: 9354178-9357398 Capsella rubella
Carub.0004s1582 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9354178-9354677 Capsella rubella
Carub.0004s1582 0.5kb downstream 0.5kb downstream 3221 true scaffold_4: 9354678-9357898 Capsella rubella
Carub.0004s1582 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9357399-9357898 Capsella rubella
Carub.0004s1582 1.0kb upstream 1.0kb upstream 3721 true scaffold_4: 9353678-9357398 Capsella rubella
Carub.0004s1582 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9353678-9354677 Capsella rubella
Carub.0004s1582 1.0kb downstream 1.0kb downstream 3721 true scaffold_4: 9354678-9358398 Capsella rubella
Carub.0004s1582 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9357399-9358398 Capsella rubella
Carub.0004s1582 2.0kb upstream 2.0kb upstream 4721 true scaffold_4: 9352678-9357398 Capsella rubella
Carub.0004s1582 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9352678-9354677 Capsella rubella
Carub.0004s1582 2.0kb downstream 2.0kb downstream 4721 true scaffold_4: 9354678-9359398 Capsella rubella
Carub.0004s1582 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9357399-9359398 Capsella rubella
Carub.0004s1582 5.0kb upstream 5.0kb upstream 7721 true scaffold_4: 9349678-9357398 Capsella rubella
Carub.0004s1582 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9349678-9354677 Capsella rubella
Carub.0004s1582 5.0kb downstream 5.0kb downstream 7721 true scaffold_4: 9354678-9362398 Capsella rubella
Carub.0004s1582 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9357399-9362398 Capsella rubella
Carub.0004s1582 10.0kb upstream 10.0kb upstream 12721 true scaffold_4: 9344678-9357398 Capsella rubella
Carub.0004s1582 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9344678-9354677 Capsella rubella
Carub.0004s1582 10.0kb downstream 10.0kb downstream 12721 true scaffold_4: 9354678-9367398 Capsella rubella
Carub.0004s1582 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9357399-9367398 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368986 5261 Brassicaceae View MSA
123829412 5264 Brassicales-Malvales View MSA
124346432 5266 SBM View MSA
124240477 5268 Malvidae View MSA
124067921 5270 Rosid View MSA
123749594 5271 Pentapetalae View MSA
122792857 5272 Eudicot View MSA
122044330 5273 Angiosperm View MSA
121348988 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain