Protein : Carub.0004s1627.1.p C. rubella v1.1
Secondary Identifier:  PAC:39238198 Organism Name:  Capsella rubella
Length:  410   Name:  Carub.0004s1627.1.p
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SummaryProteinsOther
 
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SummaryProteinsOther
 

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Proteins

4 Protein Domains

DB identifier Type Name
IPR029061 Domain Thiamin diphosphate-binding fold
IPR009014 Domain Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR005475 Domain Transketolase-like, pyrimidine-binding domain
IPR023131 Domain Mth639-like domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0004s1627.1_CDS 1233   scaffold_4: 9481510-9483812 Capsella rubella

22 Ontology Annotations

Ontology Term Db Gene/Protein Name
PWY-5464 Pathway Carub.0004s1627.1.p
PYRUVDEHYD-PWY Pathway Carub.0004s1627.1.p
PF02779 PFAM Carub.0004s1627.1.p
PF02780 PFAM Carub.0004s1627.1.p
SM00861 SMART Carub.0004s1627.1.p
SSF52518 SSF Carub.0004s1627.1.p
SSF52922 SSF Carub.0004s1627.1.p
IPR023131 InterPro Carub.0004s1627.1.p
IPR029061 InterPro Carub.0004s1627.1.p
K00162 KEGG Carub.0004s1627.1.p
RXN0-1134 MetaCyc Carub.0004s1627.1.p
PTHR11624 PANTHER Carub.0004s1627.1.p
PTHR11624:SF76 PANTHER Carub.0004s1627.1.p
PWY-5173 Pathway Carub.0004s1627.1.p
1.2.4.1 ENZYME Carub.0004s1627.1.p
G3DSA:2.60.120.630 GENE3D Carub.0004s1627.1.p
G3DSA:3.40.50.920 GENE3D Carub.0004s1627.1.p
G3DSA:3.40.50.970 GENE3D Carub.0004s1627.1.p
GO:0003824 GO Carub.0004s1627.1.p
GO:0008152 GO Carub.0004s1627.1.p
IPR005475 InterPro Carub.0004s1627.1.p
IPR009014 InterPro Carub.0004s1627.1.p

3 Pathway Components

Type Key Level Step
      12
      74
      17

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5173 Capsella rubella pathologic  
Crubella PWY-5464 Capsella rubella pathologic  
Crubella PYRUVDEHYD-PWY Capsella rubella pathologic