Gene : Carub.0004s1622 C. rubella v1.1
Defline:  (1 of 2) PTHR10209//PTHR10209:SF171 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // GIBBERELLIN 2-BETA-DIOXYGENASE 2-RELATED Genomic Order:  1622
Name:  ? Carub.0004s1622 Secondary Identifier:  ? PAC:39236428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1622 0.5kb upstream 0.5kb upstream 2254 true scaffold_4: 9470906-9473159 Capsella rubella
Carub.0004s1622 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9470906-9471405 Capsella rubella
Carub.0004s1622 0.5kb downstream 0.5kb downstream 2254 true scaffold_4: 9471406-9473659 Capsella rubella
Carub.0004s1622 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9473160-9473659 Capsella rubella
Carub.0004s1622 1.0kb upstream 1.0kb upstream 2754 true scaffold_4: 9470406-9473159 Capsella rubella
Carub.0004s1622 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9470406-9471405 Capsella rubella
Carub.0004s1622 1.0kb downstream 1.0kb downstream 2754 true scaffold_4: 9471406-9474159 Capsella rubella
Carub.0004s1622 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9473160-9474159 Capsella rubella
Carub.0004s1622 2.0kb upstream 2.0kb upstream 3754 true scaffold_4: 9469406-9473159 Capsella rubella
Carub.0004s1622 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9469406-9471405 Capsella rubella
Carub.0004s1622 2.0kb downstream 2.0kb downstream 3754 true scaffold_4: 9471406-9475159 Capsella rubella
Carub.0004s1622 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9473160-9475159 Capsella rubella
Carub.0004s1622 5.0kb upstream 5.0kb upstream 6754 true scaffold_4: 9466406-9473159 Capsella rubella
Carub.0004s1622 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9466406-9471405 Capsella rubella
Carub.0004s1622 5.0kb downstream 5.0kb downstream 6754 true scaffold_4: 9471406-9478159 Capsella rubella
Carub.0004s1622 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9473160-9478159 Capsella rubella
Carub.0004s1622 10.0kb upstream 10.0kb upstream 11754 true scaffold_4: 9461406-9473159 Capsella rubella
Carub.0004s1622 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9461406-9471405 Capsella rubella
Carub.0004s1622 10.0kb downstream 10.0kb downstream 11754 true scaffold_4: 9471406-9483159 Capsella rubella
Carub.0004s1622 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9473160-9483159 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511089 5273 Angiosperm View MSA
122372088 5261 Brassicaceae View MSA
123800292 5264 Brassicales-Malvales View MSA
124297723 5266 SBM View MSA
124149544 5268 Malvidae View MSA
123875332 5270 Rosid View MSA
123459171 5271 Pentapetalae View MSA
122494566 5272 Eudicot View MSA
120784155 5274 Embryophyte View MSA
122826090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain