Gene : Carub.0004s1438 C. rubella v1.1
Defline:  (1 of 1) PTHR22847:SF451 - E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Genomic Order:  1438
Name:  ? Carub.0004s1438 Secondary Identifier:  ? PAC:39237326
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1438 0.5kb upstream 0.5kb upstream 6277 true scaffold_4: 8777302-8783578 Capsella rubella
Carub.0004s1438 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8777302-8777801 Capsella rubella
Carub.0004s1438 0.5kb downstream 0.5kb downstream 6277 true scaffold_4: 8777802-8784078 Capsella rubella
Carub.0004s1438 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8783579-8784078 Capsella rubella
Carub.0004s1438 1.0kb upstream 1.0kb upstream 6777 true scaffold_4: 8776802-8783578 Capsella rubella
Carub.0004s1438 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8776802-8777801 Capsella rubella
Carub.0004s1438 1.0kb downstream 1.0kb downstream 6777 true scaffold_4: 8777802-8784578 Capsella rubella
Carub.0004s1438 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8783579-8784578 Capsella rubella
Carub.0004s1438 2.0kb upstream 2.0kb upstream 7777 true scaffold_4: 8775802-8783578 Capsella rubella
Carub.0004s1438 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8775802-8777801 Capsella rubella
Carub.0004s1438 2.0kb downstream 2.0kb downstream 7777 true scaffold_4: 8777802-8785578 Capsella rubella
Carub.0004s1438 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8783579-8785578 Capsella rubella
Carub.0004s1438 5.0kb upstream 5.0kb upstream 10777 true scaffold_4: 8772802-8783578 Capsella rubella
Carub.0004s1438 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8772802-8777801 Capsella rubella
Carub.0004s1438 5.0kb downstream 5.0kb downstream 10777 true scaffold_4: 8777802-8788578 Capsella rubella
Carub.0004s1438 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8783579-8788578 Capsella rubella
Carub.0004s1438 10.0kb upstream 10.0kb upstream 15777 true scaffold_4: 8767802-8783578 Capsella rubella
Carub.0004s1438 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8767802-8777801 Capsella rubella
Carub.0004s1438 10.0kb downstream 10.0kb downstream 15777 true scaffold_4: 8777802-8793578 Capsella rubella
Carub.0004s1438 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8783579-8793578 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364675 5261 Brassicaceae View MSA
123832054 5264 Brassicales-Malvales View MSA
124341887 5266 SBM View MSA
124240540 5268 Malvidae View MSA
124074253 5270 Rosid View MSA
123741862 5271 Pentapetalae View MSA
122790393 5272 Eudicot View MSA
122044386 5273 Angiosperm View MSA
121345400 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain