Gene : Carub.0004s1473 C. rubella v1.1

Defline:  (1 of 1) PTHR32195//PTHR32195:SF12 - FAMILY NOT NAMED // TYROSINE-SPECIFIC TRANSPORT PROTEIN-RELATED Genomic Order:  1473
Name:  ? Carub.0004s1473 Secondary Identifier:  ? PAC:39237235

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1473 0.5kb upstream 0.5kb upstream 2559 true scaffold_4: 8916113-8918671 Capsella rubella
Carub.0004s1473 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8918172-8918671 Capsella rubella
Carub.0004s1473 0.5kb downstream 0.5kb downstream 2559 true scaffold_4: 8915613-8918171 Capsella rubella
Carub.0004s1473 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8915613-8916112 Capsella rubella
Carub.0004s1473 1.0kb upstream 1.0kb upstream 3059 true scaffold_4: 8916113-8919171 Capsella rubella
Carub.0004s1473 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8918172-8919171 Capsella rubella
Carub.0004s1473 1.0kb downstream 1.0kb downstream 3059 true scaffold_4: 8915113-8918171 Capsella rubella
Carub.0004s1473 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8915113-8916112 Capsella rubella
Carub.0004s1473 2.0kb upstream 2.0kb upstream 4059 true scaffold_4: 8916113-8920171 Capsella rubella
Carub.0004s1473 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8918172-8920171 Capsella rubella
Carub.0004s1473 2.0kb downstream 2.0kb downstream 4059 true scaffold_4: 8914113-8918171 Capsella rubella
Carub.0004s1473 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8914113-8916112 Capsella rubella
Carub.0004s1473 5.0kb upstream 5.0kb upstream 7059 true scaffold_4: 8916113-8923171 Capsella rubella
Carub.0004s1473 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8918172-8923171 Capsella rubella
Carub.0004s1473 5.0kb downstream 5.0kb downstream 7059 true scaffold_4: 8911113-8918171 Capsella rubella
Carub.0004s1473 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8911113-8916112 Capsella rubella
Carub.0004s1473 10.0kb upstream 10.0kb upstream 12059 true scaffold_4: 8916113-8928171 Capsella rubella
Carub.0004s1473 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8918172-8928171 Capsella rubella
Carub.0004s1473 10.0kb downstream 10.0kb downstream 12059 true scaffold_4: 8906113-8918171 Capsella rubella
Carub.0004s1473 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8906113-8916112 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364677 5261 Brassicaceae View MSA
123837346 5264 Brassicales-Malvales View MSA
124337095 5266 SBM View MSA
124247621 5268 Malvidae View MSA
124062862 5270 Rosid View MSA
123741187 5271 Pentapetalae View MSA
122791918 5272 Eudicot View MSA
122042741 5273 Angiosperm View MSA
121346394 5274 Embryophyte View MSA
123426643 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain