Gene : Carub.0004s1793 C. rubella v1.1
Defline:  (1 of 2) K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Genomic Order:  1793
Name:  ? Carub.0004s1793 Secondary Identifier:  ? PAC:39238700
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1793 0.5kb upstream 0.5kb upstream 1523 true scaffold_4: 10131543-10133065 Capsella rubella
Carub.0004s1793 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10131543-10132042 Capsella rubella
Carub.0004s1793 0.5kb downstream 0.5kb downstream 1523 true scaffold_4: 10132043-10133565 Capsella rubella
Carub.0004s1793 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10133066-10133565 Capsella rubella
Carub.0004s1793 1.0kb upstream 1.0kb upstream 2023 true scaffold_4: 10131043-10133065 Capsella rubella
Carub.0004s1793 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10131043-10132042 Capsella rubella
Carub.0004s1793 1.0kb downstream 1.0kb downstream 2023 true scaffold_4: 10132043-10134065 Capsella rubella
Carub.0004s1793 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10133066-10134065 Capsella rubella
Carub.0004s1793 2.0kb upstream 2.0kb upstream 3023 true scaffold_4: 10130043-10133065 Capsella rubella
Carub.0004s1793 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10130043-10132042 Capsella rubella
Carub.0004s1793 2.0kb downstream 2.0kb downstream 3023 true scaffold_4: 10132043-10135065 Capsella rubella
Carub.0004s1793 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10133066-10135065 Capsella rubella
Carub.0004s1793 5.0kb upstream 5.0kb upstream 6023 true scaffold_4: 10127043-10133065 Capsella rubella
Carub.0004s1793 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10127043-10132042 Capsella rubella
Carub.0004s1793 5.0kb downstream 5.0kb downstream 6023 true scaffold_4: 10132043-10138065 Capsella rubella
Carub.0004s1793 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10133066-10138065 Capsella rubella
Carub.0004s1793 10.0kb upstream 10.0kb upstream 11023 true scaffold_4: 10122043-10133065 Capsella rubella
Carub.0004s1793 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10122043-10132042 Capsella rubella
Carub.0004s1793 10.0kb downstream 10.0kb downstream 11023 true scaffold_4: 10132043-10143065 Capsella rubella
Carub.0004s1793 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10133066-10143065 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379715 5261 Brassicaceae View MSA
123841008 5264 Brassicales-Malvales View MSA
124341254 5266 SBM View MSA
124250872 5268 Malvidae View MSA
124071470 5270 Rosid View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain