Gene : Carub.0004s1786 C. rubella v1.1
Defline:  (1 of 1) PTHR24322:SF510 - ALCOHOL DEHYDROGENASE (ATA1) Genomic Order:  1786
Name:  ? Carub.0004s1786 Secondary Identifier:  ? PAC:39236316
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-695 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1786 0.5kb upstream 0.5kb upstream 1532 true scaffold_4: 10108141-10109672 Capsella rubella
Carub.0004s1786 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10108141-10108640 Capsella rubella
Carub.0004s1786 0.5kb downstream 0.5kb downstream 1532 true scaffold_4: 10108641-10110172 Capsella rubella
Carub.0004s1786 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10109673-10110172 Capsella rubella
Carub.0004s1786 1.0kb upstream 1.0kb upstream 2032 true scaffold_4: 10107641-10109672 Capsella rubella
Carub.0004s1786 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10107641-10108640 Capsella rubella
Carub.0004s1786 1.0kb downstream 1.0kb downstream 2032 true scaffold_4: 10108641-10110672 Capsella rubella
Carub.0004s1786 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10109673-10110672 Capsella rubella
Carub.0004s1786 2.0kb upstream 2.0kb upstream 3032 true scaffold_4: 10106641-10109672 Capsella rubella
Carub.0004s1786 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10106641-10108640 Capsella rubella
Carub.0004s1786 2.0kb downstream 2.0kb downstream 3032 true scaffold_4: 10108641-10111672 Capsella rubella
Carub.0004s1786 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10109673-10111672 Capsella rubella
Carub.0004s1786 5.0kb upstream 5.0kb upstream 6032 true scaffold_4: 10103641-10109672 Capsella rubella
Carub.0004s1786 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10103641-10108640 Capsella rubella
Carub.0004s1786 5.0kb downstream 5.0kb downstream 6032 true scaffold_4: 10108641-10114672 Capsella rubella
Carub.0004s1786 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10109673-10114672 Capsella rubella
Carub.0004s1786 10.0kb upstream 10.0kb upstream 11032 true scaffold_4: 10098641-10109672 Capsella rubella
Carub.0004s1786 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10098641-10108640 Capsella rubella
Carub.0004s1786 10.0kb downstream 10.0kb downstream 11032 true scaffold_4: 10108641-10119672 Capsella rubella
Carub.0004s1786 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10109673-10119672 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371736 5261 Brassicaceae View MSA
123827401 5264 Brassicales-Malvales View MSA
124342614 5266 SBM View MSA
124239258 5268 Malvidae View MSA
124061755 5270 Rosid View MSA
123748267 5271 Pentapetalae View MSA
122788265 5272 Eudicot View MSA
122042997 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain