Gene : Carub.0004s1639 C. rubella v1.1
Defline:  (1 of 2) PTHR31614//PTHR31614:SF15 - FAMILY NOT NAMED // ARABINOGALACTAN PROTEIN 30-RELATED Genomic Order:  1639
Name:  ? Carub.0004s1639 Secondary Identifier:  ? PAC:39236731
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1639 0.5kb upstream 0.5kb upstream 1954 true scaffold_4: 9564502-9566455 Capsella rubella
Carub.0004s1639 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9565956-9566455 Capsella rubella
Carub.0004s1639 0.5kb downstream 0.5kb downstream 1954 true scaffold_4: 9564002-9565955 Capsella rubella
Carub.0004s1639 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9564002-9564501 Capsella rubella
Carub.0004s1639 1.0kb upstream 1.0kb upstream 2454 true scaffold_4: 9564502-9566955 Capsella rubella
Carub.0004s1639 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9565956-9566955 Capsella rubella
Carub.0004s1639 1.0kb downstream 1.0kb downstream 2454 true scaffold_4: 9563502-9565955 Capsella rubella
Carub.0004s1639 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9563502-9564501 Capsella rubella
Carub.0004s1639 2.0kb upstream 2.0kb upstream 3454 true scaffold_4: 9564502-9567955 Capsella rubella
Carub.0004s1639 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9565956-9567955 Capsella rubella
Carub.0004s1639 2.0kb downstream 2.0kb downstream 3454 true scaffold_4: 9562502-9565955 Capsella rubella
Carub.0004s1639 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9562502-9564501 Capsella rubella
Carub.0004s1639 5.0kb upstream 5.0kb upstream 6454 true scaffold_4: 9564502-9570955 Capsella rubella
Carub.0004s1639 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9565956-9570955 Capsella rubella
Carub.0004s1639 5.0kb downstream 5.0kb downstream 6454 true scaffold_4: 9559502-9565955 Capsella rubella
Carub.0004s1639 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9559502-9564501 Capsella rubella
Carub.0004s1639 10.0kb upstream 10.0kb upstream 11454 true scaffold_4: 9564502-9575955 Capsella rubella
Carub.0004s1639 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9565956-9575955 Capsella rubella
Carub.0004s1639 10.0kb downstream 10.0kb downstream 11454 true scaffold_4: 9554502-9565955 Capsella rubella
Carub.0004s1639 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9554502-9564501 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335748 5261 Brassicaceae Singleton cluster - no MSA
123776499 5264 Brassicales-Malvales Singleton cluster - no MSA
124274889 5266 SBM Singleton cluster - no MSA
124252555 5268 Malvidae View MSA
124050511 5270 Rosid View MSA
123745360 5271 Pentapetalae View MSA
122795562 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain