Gene : Carub.0004s1674 C. rubella v1.1
Defline:  (1 of 1) 3.5.4.10 - IMP cyclohydrolase / Inosinicase Genomic Order:  1674
Name:  ? Carub.0004s1674 Secondary Identifier:  ? PAC:39237453
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6124 Capsella rubella pathologic  
Crubella PWY-841 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1674 0.5kb upstream 0.5kb upstream 3424 true scaffold_4: 9695865-9699288 Capsella rubella
Carub.0004s1674 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9698789-9699288 Capsella rubella
Carub.0004s1674 0.5kb downstream 0.5kb downstream 3424 true scaffold_4: 9695365-9698788 Capsella rubella
Carub.0004s1674 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9695365-9695864 Capsella rubella
Carub.0004s1674 1.0kb upstream 1.0kb upstream 3924 true scaffold_4: 9695865-9699788 Capsella rubella
Carub.0004s1674 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9698789-9699788 Capsella rubella
Carub.0004s1674 1.0kb downstream 1.0kb downstream 3924 true scaffold_4: 9694865-9698788 Capsella rubella
Carub.0004s1674 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9694865-9695864 Capsella rubella
Carub.0004s1674 2.0kb upstream 2.0kb upstream 4924 true scaffold_4: 9695865-9700788 Capsella rubella
Carub.0004s1674 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9698789-9700788 Capsella rubella
Carub.0004s1674 2.0kb downstream 2.0kb downstream 4924 true scaffold_4: 9693865-9698788 Capsella rubella
Carub.0004s1674 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9693865-9695864 Capsella rubella
Carub.0004s1674 5.0kb upstream 5.0kb upstream 7924 true scaffold_4: 9695865-9703788 Capsella rubella
Carub.0004s1674 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9698789-9703788 Capsella rubella
Carub.0004s1674 5.0kb downstream 5.0kb downstream 7924 true scaffold_4: 9690865-9698788 Capsella rubella
Carub.0004s1674 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9690865-9695864 Capsella rubella
Carub.0004s1674 10.0kb upstream 10.0kb upstream 12924 true scaffold_4: 9695865-9708788 Capsella rubella
Carub.0004s1674 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9698789-9708788 Capsella rubella
Carub.0004s1674 10.0kb downstream 10.0kb downstream 12924 true scaffold_4: 9685865-9698788 Capsella rubella
Carub.0004s1674 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9685865-9695864 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365790 5261 Brassicaceae View MSA
123829206 5264 Brassicales-Malvales View MSA
124338939 5266 SBM View MSA
124238777 5268 Malvidae View MSA
124063677 5270 Rosid View MSA
123740756 5271 Pentapetalae View MSA
122787954 5272 Eudicot View MSA
122042847 5273 Angiosperm View MSA
121346530 5274 Embryophyte View MSA
123425039 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain