Gene : Carub.0004s1687 C. rubella v1.1

Defline:  (1 of 3) K02921 - large subunit ribosomal protein L37Ae (RP-L37Ae, RPL37A) Genomic Order:  1687
Name:  ? Carub.0004s1687 Secondary Identifier:  ? PAC:39236930

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1687 0.5kb upstream 0.5kb upstream 2301 true scaffold_4: 9755965-9758265 Capsella rubella
Carub.0004s1687 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9757766-9758265 Capsella rubella
Carub.0004s1687 0.5kb downstream 0.5kb downstream 2301 true scaffold_4: 9755465-9757765 Capsella rubella
Carub.0004s1687 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9755465-9755964 Capsella rubella
Carub.0004s1687 1.0kb upstream 1.0kb upstream 2801 true scaffold_4: 9755965-9758765 Capsella rubella
Carub.0004s1687 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9757766-9758765 Capsella rubella
Carub.0004s1687 1.0kb downstream 1.0kb downstream 2801 true scaffold_4: 9754965-9757765 Capsella rubella
Carub.0004s1687 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9754965-9755964 Capsella rubella
Carub.0004s1687 2.0kb upstream 2.0kb upstream 3801 true scaffold_4: 9755965-9759765 Capsella rubella
Carub.0004s1687 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9757766-9759765 Capsella rubella
Carub.0004s1687 2.0kb downstream 2.0kb downstream 3801 true scaffold_4: 9753965-9757765 Capsella rubella
Carub.0004s1687 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9753965-9755964 Capsella rubella
Carub.0004s1687 5.0kb upstream 5.0kb upstream 6801 true scaffold_4: 9755965-9762765 Capsella rubella
Carub.0004s1687 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9757766-9762765 Capsella rubella
Carub.0004s1687 5.0kb downstream 5.0kb downstream 6801 true scaffold_4: 9750965-9757765 Capsella rubella
Carub.0004s1687 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9750965-9755964 Capsella rubella
Carub.0004s1687 10.0kb upstream 10.0kb upstream 11801 true scaffold_4: 9755965-9767765 Capsella rubella
Carub.0004s1687 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9757766-9767765 Capsella rubella
Carub.0004s1687 10.0kb downstream 10.0kb downstream 11801 true scaffold_4: 9745965-9757765 Capsella rubella
Carub.0004s1687 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9745965-9755964 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381454 5261 Brassicaceae View MSA
123837123 5264 Brassicales-Malvales View MSA
124351594 5266 SBM View MSA
124242723 5268 Malvidae View MSA
124063023 5270 Rosid View MSA
123742200 5271 Pentapetalae View MSA
122786049 5272 Eudicot View MSA
122042071 5273 Angiosperm View MSA
121350230 5274 Embryophyte View MSA
123426457 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain