Gene : Carub.0004s1720 C. rubella v1.1
Defline:  (1 of 2) PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Genomic Order:  1720
Name:  ? Carub.0004s1720 Secondary Identifier:  ? PAC:39236349
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1720 0.5kb upstream 0.5kb upstream 4198 true scaffold_4: 9850813-9855010 Capsella rubella
Carub.0004s1720 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9854511-9855010 Capsella rubella
Carub.0004s1720 0.5kb downstream 0.5kb downstream 4198 true scaffold_4: 9850313-9854510 Capsella rubella
Carub.0004s1720 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9850313-9850812 Capsella rubella
Carub.0004s1720 1.0kb upstream 1.0kb upstream 4698 true scaffold_4: 9850813-9855510 Capsella rubella
Carub.0004s1720 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9854511-9855510 Capsella rubella
Carub.0004s1720 1.0kb downstream 1.0kb downstream 4698 true scaffold_4: 9849813-9854510 Capsella rubella
Carub.0004s1720 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9849813-9850812 Capsella rubella
Carub.0004s1720 2.0kb upstream 2.0kb upstream 5698 true scaffold_4: 9850813-9856510 Capsella rubella
Carub.0004s1720 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9854511-9856510 Capsella rubella
Carub.0004s1720 2.0kb downstream 2.0kb downstream 5698 true scaffold_4: 9848813-9854510 Capsella rubella
Carub.0004s1720 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9848813-9850812 Capsella rubella
Carub.0004s1720 5.0kb upstream 5.0kb upstream 8698 true scaffold_4: 9850813-9859510 Capsella rubella
Carub.0004s1720 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9854511-9859510 Capsella rubella
Carub.0004s1720 5.0kb downstream 5.0kb downstream 8698 true scaffold_4: 9845813-9854510 Capsella rubella
Carub.0004s1720 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9845813-9850812 Capsella rubella
Carub.0004s1720 10.0kb upstream 10.0kb upstream 13698 true scaffold_4: 9850813-9864510 Capsella rubella
Carub.0004s1720 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9854511-9864510 Capsella rubella
Carub.0004s1720 10.0kb downstream 10.0kb downstream 13698 true scaffold_4: 9840813-9854510 Capsella rubella
Carub.0004s1720 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9840813-9850812 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368233 5261 Brassicaceae View MSA
123799517 5264 Brassicales-Malvales View MSA
124297029 5266 SBM View MSA
124250602 5268 Malvidae View MSA
124062640 5270 Rosid View MSA
123747359 5271 Pentapetalae View MSA
122788093 5272 Eudicot View MSA
122047704 5273 Angiosperm View MSA
121349325 5274 Embryophyte View MSA
123381278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain