Gene : Carub.0004s1718 C. rubella v1.1
Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  1718
Name:  ? Carub.0004s1718 Secondary Identifier:  ? PAC:39238722
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1718 0.5kb upstream 0.5kb upstream 2175 true scaffold_4: 9846726-9848900 Capsella rubella
Carub.0004s1718 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9848401-9848900 Capsella rubella
Carub.0004s1718 0.5kb downstream 0.5kb downstream 2175 true scaffold_4: 9846226-9848400 Capsella rubella
Carub.0004s1718 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9846226-9846725 Capsella rubella
Carub.0004s1718 1.0kb upstream 1.0kb upstream 2675 true scaffold_4: 9846726-9849400 Capsella rubella
Carub.0004s1718 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9848401-9849400 Capsella rubella
Carub.0004s1718 1.0kb downstream 1.0kb downstream 2675 true scaffold_4: 9845726-9848400 Capsella rubella
Carub.0004s1718 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9845726-9846725 Capsella rubella
Carub.0004s1718 2.0kb upstream 2.0kb upstream 3675 true scaffold_4: 9846726-9850400 Capsella rubella
Carub.0004s1718 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9848401-9850400 Capsella rubella
Carub.0004s1718 2.0kb downstream 2.0kb downstream 3675 true scaffold_4: 9844726-9848400 Capsella rubella
Carub.0004s1718 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9844726-9846725 Capsella rubella
Carub.0004s1718 5.0kb upstream 5.0kb upstream 6675 true scaffold_4: 9846726-9853400 Capsella rubella
Carub.0004s1718 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9848401-9853400 Capsella rubella
Carub.0004s1718 5.0kb downstream 5.0kb downstream 6675 true scaffold_4: 9841726-9848400 Capsella rubella
Carub.0004s1718 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9841726-9846725 Capsella rubella
Carub.0004s1718 10.0kb upstream 10.0kb upstream 11675 true scaffold_4: 9846726-9858400 Capsella rubella
Carub.0004s1718 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9848401-9858400 Capsella rubella
Carub.0004s1718 10.0kb downstream 10.0kb downstream 11675 true scaffold_4: 9836726-9848400 Capsella rubella
Carub.0004s1718 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9836726-9846725 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372392 5261 Brassicaceae View MSA
123831593 5264 Brassicales-Malvales View MSA
124344913 5266 SBM View MSA
124239199 5268 Malvidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain