Gene : Carub.0004s1986 C. rubella v1.1
Genomic Order:  1986 Name:  ? Carub.0004s1986
Secondary Identifier:  ? PAC:39236388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1986 0.5kb upstream 0.5kb upstream 3830 true scaffold_4: 10928937-10932766 Capsella rubella
Carub.0004s1986 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10928937-10929436 Capsella rubella
Carub.0004s1986 0.5kb downstream 0.5kb downstream 3830 true scaffold_4: 10929437-10933266 Capsella rubella
Carub.0004s1986 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10932767-10933266 Capsella rubella
Carub.0004s1986 1.0kb upstream 1.0kb upstream 4330 true scaffold_4: 10928437-10932766 Capsella rubella
Carub.0004s1986 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10928437-10929436 Capsella rubella
Carub.0004s1986 1.0kb downstream 1.0kb downstream 4330 true scaffold_4: 10929437-10933766 Capsella rubella
Carub.0004s1986 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10932767-10933766 Capsella rubella
Carub.0004s1986 2.0kb upstream 2.0kb upstream 5330 true scaffold_4: 10927437-10932766 Capsella rubella
Carub.0004s1986 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10927437-10929436 Capsella rubella
Carub.0004s1986 2.0kb downstream 2.0kb downstream 5330 true scaffold_4: 10929437-10934766 Capsella rubella
Carub.0004s1986 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10932767-10934766 Capsella rubella
Carub.0004s1986 5.0kb upstream 5.0kb upstream 8330 true scaffold_4: 10924437-10932766 Capsella rubella
Carub.0004s1986 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10924437-10929436 Capsella rubella
Carub.0004s1986 5.0kb downstream 5.0kb downstream 8330 true scaffold_4: 10929437-10937766 Capsella rubella
Carub.0004s1986 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10932767-10937766 Capsella rubella
Carub.0004s1986 10.0kb upstream 10.0kb upstream 13330 true scaffold_4: 10919437-10932766 Capsella rubella
Carub.0004s1986 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10919437-10929436 Capsella rubella
Carub.0004s1986 10.0kb downstream 10.0kb downstream 13330 true scaffold_4: 10929437-10942766 Capsella rubella
Carub.0004s1986 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10932767-10942766 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121497829 5273 Angiosperm Singleton cluster - no MSA
122335719 5261 Brassicaceae Singleton cluster - no MSA
123776471 5264 Brassicales-Malvales Singleton cluster - no MSA
124274861 5266 SBM Singleton cluster - no MSA
124130304 5268 Malvidae Singleton cluster - no MSA
123858782 5270 Rosid Singleton cluster - no MSA
123444482 5271 Pentapetalae Singleton cluster - no MSA
122480045 5272 Eudicot Singleton cluster - no MSA
120771185 5274 Embryophyte Singleton cluster - no MSA
122813547 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain