Gene : Carub.0004s2056 C. rubella v1.1

Genomic Order:  2056 Name:  ? Carub.0004s2056
Secondary Identifier:  ? PAC:39236896

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2056 0.5kb upstream 0.5kb upstream 2401 true scaffold_4: 11204835-11207235 Capsella rubella
Carub.0004s2056 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11206736-11207235 Capsella rubella
Carub.0004s2056 0.5kb downstream 0.5kb downstream 2401 true scaffold_4: 11204335-11206735 Capsella rubella
Carub.0004s2056 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11204335-11204834 Capsella rubella
Carub.0004s2056 1.0kb upstream 1.0kb upstream 2901 true scaffold_4: 11204835-11207735 Capsella rubella
Carub.0004s2056 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11206736-11207735 Capsella rubella
Carub.0004s2056 1.0kb downstream 1.0kb downstream 2901 true scaffold_4: 11203835-11206735 Capsella rubella
Carub.0004s2056 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11203835-11204834 Capsella rubella
Carub.0004s2056 2.0kb upstream 2.0kb upstream 3901 true scaffold_4: 11204835-11208735 Capsella rubella
Carub.0004s2056 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11206736-11208735 Capsella rubella
Carub.0004s2056 2.0kb downstream 2.0kb downstream 3901 true scaffold_4: 11202835-11206735 Capsella rubella
Carub.0004s2056 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11202835-11204834 Capsella rubella
Carub.0004s2056 5.0kb upstream 5.0kb upstream 6901 true scaffold_4: 11204835-11211735 Capsella rubella
Carub.0004s2056 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11206736-11211735 Capsella rubella
Carub.0004s2056 5.0kb downstream 5.0kb downstream 6901 true scaffold_4: 11199835-11206735 Capsella rubella
Carub.0004s2056 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11199835-11204834 Capsella rubella
Carub.0004s2056 10.0kb upstream 10.0kb upstream 11901 true scaffold_4: 11204835-11216735 Capsella rubella
Carub.0004s2056 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11206736-11216735 Capsella rubella
Carub.0004s2056 10.0kb downstream 10.0kb downstream 11901 true scaffold_4: 11194835-11206735 Capsella rubella
Carub.0004s2056 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11194835-11204834 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377134 5261 Brassicaceae View MSA
123837361 5264 Brassicales-Malvales View MSA
124346863 5266 SBM View MSA
124244216 5268 Malvidae View MSA
124068800 5270 Rosid View MSA
123741446 5271 Pentapetalae View MSA
122794824 5272 Eudicot View MSA
122042245 5273 Angiosperm View MSA
121309940 5274 Embryophyte View MSA
123425461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain