Gene : Carub.0004s2045 C. rubella v1.1

Defline:  (1 of 1) K13424 - WRKY transcription factor 33 (WRKY33) Genomic Order:  2045
Name:  ? Carub.0004s2045 Secondary Identifier:  ? PAC:39235915

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2045 0.5kb upstream 0.5kb upstream 2843 true scaffold_4: 11167004-11169846 Capsella rubella
Carub.0004s2045 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11167004-11167503 Capsella rubella
Carub.0004s2045 0.5kb downstream 0.5kb downstream 2843 true scaffold_4: 11167504-11170346 Capsella rubella
Carub.0004s2045 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11169847-11170346 Capsella rubella
Carub.0004s2045 1.0kb upstream 1.0kb upstream 3343 true scaffold_4: 11166504-11169846 Capsella rubella
Carub.0004s2045 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11166504-11167503 Capsella rubella
Carub.0004s2045 1.0kb downstream 1.0kb downstream 3343 true scaffold_4: 11167504-11170846 Capsella rubella
Carub.0004s2045 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11169847-11170846 Capsella rubella
Carub.0004s2045 2.0kb upstream 2.0kb upstream 4343 true scaffold_4: 11165504-11169846 Capsella rubella
Carub.0004s2045 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11165504-11167503 Capsella rubella
Carub.0004s2045 2.0kb downstream 2.0kb downstream 4343 true scaffold_4: 11167504-11171846 Capsella rubella
Carub.0004s2045 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11169847-11171846 Capsella rubella
Carub.0004s2045 5.0kb upstream 5.0kb upstream 7343 true scaffold_4: 11162504-11169846 Capsella rubella
Carub.0004s2045 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11162504-11167503 Capsella rubella
Carub.0004s2045 5.0kb downstream 5.0kb downstream 7343 true scaffold_4: 11167504-11174846 Capsella rubella
Carub.0004s2045 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11169847-11174846 Capsella rubella
Carub.0004s2045 10.0kb upstream 10.0kb upstream 12343 true scaffold_4: 11157504-11169846 Capsella rubella
Carub.0004s2045 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11157504-11167503 Capsella rubella
Carub.0004s2045 10.0kb downstream 10.0kb downstream 12343 true scaffold_4: 11167504-11179846 Capsella rubella
Carub.0004s2045 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11169847-11179846 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374758 5261 Brassicaceae View MSA
123836427 5264 Brassicales-Malvales View MSA
124348365 5266 SBM View MSA
124251908 5268 Malvidae View MSA
124071256 5270 Rosid View MSA
123740881 5271 Pentapetalae View MSA
122792726 5272 Eudicot View MSA
122046971 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain