Gene : Carub.0004s1872 C. rubella v1.1
Defline:  (1 of 1) PTHR11964:SF15 - S-ADENOSYLMETHIONINE SYNTHASE 3 Genomic Order:  1872
Name:  ? Carub.0004s1872 Secondary Identifier:  ? PAC:39237463
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ETHYL-PWY Capsella rubella pathologic  
Crubella PWY-5041 Capsella rubella pathologic  
Crubella PWY-7270 Capsella rubella pathologic  
Crubella PWY-7528 Capsella rubella pathologic  
Crubella SAM-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1872 0.5kb upstream 0.5kb upstream 2534 true scaffold_4: 10478903-10481436 Capsella rubella
Carub.0004s1872 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10480937-10481436 Capsella rubella
Carub.0004s1872 0.5kb downstream 0.5kb downstream 2534 true scaffold_4: 10478403-10480936 Capsella rubella
Carub.0004s1872 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10478403-10478902 Capsella rubella
Carub.0004s1872 1.0kb upstream 1.0kb upstream 3034 true scaffold_4: 10478903-10481936 Capsella rubella
Carub.0004s1872 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10480937-10481936 Capsella rubella
Carub.0004s1872 1.0kb downstream 1.0kb downstream 3034 true scaffold_4: 10477903-10480936 Capsella rubella
Carub.0004s1872 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10477903-10478902 Capsella rubella
Carub.0004s1872 2.0kb upstream 2.0kb upstream 4034 true scaffold_4: 10478903-10482936 Capsella rubella
Carub.0004s1872 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10480937-10482936 Capsella rubella
Carub.0004s1872 2.0kb downstream 2.0kb downstream 4034 true scaffold_4: 10476903-10480936 Capsella rubella
Carub.0004s1872 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10476903-10478902 Capsella rubella
Carub.0004s1872 5.0kb upstream 5.0kb upstream 7034 true scaffold_4: 10478903-10485936 Capsella rubella
Carub.0004s1872 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10480937-10485936 Capsella rubella
Carub.0004s1872 5.0kb downstream 5.0kb downstream 7034 true scaffold_4: 10473903-10480936 Capsella rubella
Carub.0004s1872 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10473903-10478902 Capsella rubella
Carub.0004s1872 10.0kb upstream 10.0kb upstream 12034 true scaffold_4: 10478903-10490936 Capsella rubella
Carub.0004s1872 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10480937-10490936 Capsella rubella
Carub.0004s1872 10.0kb downstream 10.0kb downstream 12034 true scaffold_4: 10468903-10480936 Capsella rubella
Carub.0004s1872 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10468903-10478902 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363158 5261 Brassicaceae View MSA
123833853 5264 Brassicales-Malvales View MSA
124351600 5266 SBM View MSA
124253491 5268 Malvidae View MSA
124071193 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain